Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00056 ATGTCTCTAAAGATAGCAGCAGAAATTTATCCAAAATCACCATCAGAGACAGTGGAGGAACCATTGATTGTGGTAAACGAGTATGATGAAGATAGACACAAGGTGGCAGTAGAGAAACTTGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAATTGCATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTCGGGGTGATAAGAGGGTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATTTTGGGGCTCAGAGTCTCCCCTCGACACAGGAGATTTGGCATTGGCACAAAACTAGTTCAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACCAATGAGCCTTCAGTGAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGGACTCTAACCATACTAGTGCAACCTGTGCATGCTCACTACAAACCAATCAGCTCCAATGTTGCTGTGCTTCGCCTTCCACCACGCCTAGCAGGGTCCATGTATAACCAGTTGTTTGCCAATTCAGAATTTTACCCAAAAGACATAGACTTAATCTTGTCCAACAACCTTAATTTGGGGACTTTCATGGCCATCCCCAAGAAGTACTTGTCCAAGTGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTATGCAATATTAAGCGTGTGGAACACCAAGGATGTGTTCAAATTGCAAGTGAAGGGTGTGTCACCATTGGCACATGCCTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCATTTCCGGATGTTTTTAGGCCATTTGGGGTTTATTTTGTGTATGGACTACACATGGAGGGAAAGTGTGGTGCTCAACTAATGAAGTGCTTGTGTGCATTTGTGCATAACATGGCAAGAGATGGTGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTCAGAGACGCAGTCCCACATTGGAGCAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTCACAAGGATTCATCTCAAACCTCTGATTGGTTCACTTCTAGATCCTCTTCACCAGTAATATTTGTTGATCCTCGAGATTTTTGA 1206 0.4469 MSLKIAAEIYPKSPSETVEEPLIVVNEYDEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVQHLEEWCKQKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYNQLFANSEFYPKDIDLILSNNLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFVYGLHMEGKCGAQLMKCLCAFVHNMARDGGGCGAIVAELGQRDPVRDAVPHWSKFSWAEDMWCIKNLHKDSSQTSDWFTSRSSSPVIFVDPRDF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00056 401 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Phco1g00056 401 Gene3D - 30 169 - -
Phco1g00056 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Phco1g00056 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 401 - -
Phco1g00056 401 CDD NAT_SF 74 144 - -
Phco1g00056 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Phco1g00056 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00056 Phco-Chr1 425759 427990 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco1g00056 Acetyltransf_1 2.1e-18 CL0257