Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00049 ATGGCTCATATCTCATTCTCCTCATCTGCAAAGAACTCTTCTTGTTCGATGACCAACATAGACAACTTACCTGATGATGTGTTGAGAGATATATTGATTCTGATGCCATTTAGATCCATTGCGAAATCTAAGTGTGTGTGCAAACGTTGGTTGAGAATGATCTCAAGTCCTTCTTTCCCAACAGAATTTGTGTCTCGCCAACACTCTCTCTTCAGCACCTACTTGACCTTCATTTCATCCCACCAACTCATGCTCGGTTTCTTCCCCAAAGATTTAATCTTGAAGTTAAATATCCACCAGGCTCCTTTATCGCCGGACACCATCATAAAGGGGAGCTTGTGTGGCTATTCAAACGGCTTGTTCTTGTGCTGCAGTAACAGATACACAACTGGTCGTGGCTACTTTGTGTACGATCCACTCACCAAGCAATGCACCCATATACCTTCTTTTTCTGATGAAGATAGGGGACAACGGTTATACGCTGTTGGCTTCCTTTCTCATACTCATTACCCCGAAGAAGGAGAAGAAGAACCTAGGCGCTGCTTCTGGGTGGTGATTGTAAGAACCTTTATAAGAAGACTGTATGAGTTTGAAGTGGAGGATTTCTCCTCCAAGACAGGAAAATGGAGAAAGACATATTCGCGTTGCGAGGATGGCTTTGCCTTTGCTCCTCACTGGATGCTCAGTTTTGCGTTTGGGGAGTTCCTGTATTTCATGGGGAGTACAAATATTTTTGTGTTTGATCCTAATTTTTTGTTTTCTAGTACTATTGATTACCCTGAAGATGCTGATGCTATGAATATAATGAGCTTTGGATACCTTGGATGCTCAGAAGACATTGTGAGGATCGCTGATATTACCAATAACGATTTGAGAGTGTGGGAACTAGTGGACCCTTTCACATGGCATTTGGTGCACGAGACCAATCTGACTCAATATCTTCCCACCAGATTTTGCAGTAATTATTACAAGCGTGTAGCGGGTTTCCATCCCTATGATGGAGACATTGTGTATTTGTACTCCTATGTCGATGGGATTTTTGTTGCCAACCTACGCACAAACAAATTTGTGCCAATCCCTGGTTATGACAAATCAGATATTAGTCCCTTTCAAGTAGAGCTCTCTCCAATTCCATATGCAGAAAATCATTGA 1152 0.4219 MAHISFSSSAKNSSCSMTNIDNLPDDVLRDILILMPFRSIAKSKCVCKRWLRMISSPSFPTEFVSRQHSLFSTYLTFISSHQLMLGFFPKDLILKLNIHQAPLSPDTIIKGSLCGYSNGLFLCCSNRYTTGRGYFVYDPLTKQCTHIPSFSDEDRGQRLYAVGFLSHTHYPEEGEEEPRRCFWVVIVRTFIRRLYEFEVEDFSSKTGKWRKTYSRCEDGFAFAPHWMLSFAFGEFLYFMGSTNIFVFDPNFLFSSTIDYPEDADAMNIMSFGYLGCSEDIVRIADITNNDLRVWELVDPFTWHLVHETNLTQYLPTRFCSNYYKRVAGFHPYDGDIVYLYSYVDGIFVANLRTNKFVPIPGYDKSDISPFQVELSPIPYAENH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00049 383 CDD F-box_AtFBW1-like 21 59 - -
Phco1g00049 383 PANTHER BNACNNG10540D PROTEIN 10 355 - -
Phco1g00049 383 Pfam F-box domain 20 59 IPR001810 GO:0005515
Phco1g00049 383 Gene3D - 13 61 - -
Phco1g00049 383 SUPERFAMILY Galactose oxidase, central domain 112 360 IPR011043 -
Phco1g00049 383 ProSiteProfiles F-box domain profile. 17 67 IPR001810 GO:0005515
Phco1g00049 383 SUPERFAMILY F-box domain 15 83 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00049 Phco-Chr1 392168 393319 Dispersed