Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00042 ATGGAGCGACCCATAAGCTCTGTACATTTCGAGTACGTGGCCTTGTTCATATTGTGCACCACAGTGTTTGCTTCCGCCACCACTTCTCAGCACCAAGAATCACAATCTCGTCAACATAAAGAGGCCAGTTACCTGAAGATGGTGGTGAACGCCACCGAGTTGCCAATGGAAGAATACTATGACTACATCATCGTGGGTGGCGGCACTGCGGGGTGCCCGCTGGCGGCGACGCTCTCGCAGTCGTTTAGGGTGCTCGTGCTGGAAAGAGGAGGCGTTGGGAGCGGGAACCCCAATCTGATGAACCAAGAAGGGTTCTTGACCAACCTCTTGAACGCTGAGACTGAGGACTCGCCCGCGCAGGCTTTCATTTCGGAGGAGGGAGTGCCCAACGCTCGTGGGCGGGTTCTTGGCGGCAGCAGCGCCATCAACGCGGGCTTCTACAGCCGAGCCCACCGGGATTTCTTCGACAGGTCGGGCTTGCCGTGGGACCTGACGCTGGTGAACCAGTCGTACCAGTGGGTGGAGAAGGAAATCGTATTCAGACCGAAACTCAAGACGTGGCAATCCGCGGTTCGCGATGGCTTGCTGGAAGCAGGGGTCACTCCCTACAACGGTTTCACTCTGGACCACGCCAAGGGGACCAAGATTGGGGGCTCCACCTTCGACGGCTCTGGCAGAAGACACACCTCCGCGGACCTTCTCAGATACGCTCGCCCATCCAACATCAAGGTCGCTGTTTACGCCACCGTGGAGAGGCTGCTTCTGGCGGGTTCCAGCGCCATTGGAGCCCTGTACCGCGACCAGAGAGGGAGGCACCACCACGCGTTCTTGCGGGAACACGGAGAGGTGATTCTCTCGGCCGGTGCCATTGGAAGCCCTCAGCTTCTTCTTCTGAGCGGGATCGGTCCAAGGCCCTATCTCTCTTCATGGGGGATCCCCGTGGCTCACCACCTCCCCTACGTGGGCCACTTCCTCTACGATAATCCCAGGAACGGAATCACCATTCTCCCCTCCCTTCCACTCGACCATTCTCTCATCCAAGTCGTCGGGATTACCGATTCCGGCGCTTACATCGAGGCCGCATCCAACGTCGTCCCTTTCATCTCCCCTCGACACAATGCCTTCGTCCGCTCCCCCCTCTACCTCACCGTGGCCACCCTCATTTCCAAGATTTCCGGCCCTCTCTCCGCCGGCTTTCTGAGACTCGCTTCCACCGACGTCGACGCCAATCCCCGCGTGAGGTTCAATTACTTCGACAACCTCGTGGACCTTGAGCGCTGCGTCAACGGGACCAGGAAGATAGCCGAAATCCTCAGGAGCAGGGCATTGAAGGACTTTAAGTTCTCCAACTGGTTCGGGGAGCAAGACTTCCGGTTCATAGGCCCCGCCTTGCCGCTTCACCAAACGGACTTTCCTCGCATGGCCAATTTCTGCCGGCGGACTGTGAGCACCATCTGGCACTACCACGGTGGCTGCGTGGTTGGCAGGGTGGTTGATCCCCATCTGAAGGTCATTGGAATGGATTCTCTTCGTATTGTTGACGGATCCGTCTTCAGCGTATCGCCCGGAACCAATCCTCAGGCCACCCTTATGATGCTCGGACGGTATTTTGGGTTCAAGATTATCACAGAAAGGAACGATTACAAATGA 1650 0.5758 MERPISSVHFEYVALFILCTTVFASATTSQHQESQSRQHKEASYLKMVVNATELPMEEYYDYIIVGGGTAGCPLAATLSQSFRVLVLERGGVGSGNPNLMNQEGFLTNLLNAETEDSPAQAFISEEGVPNARGRVLGGSSAINAGFYSRAHRDFFDRSGLPWDLTLVNQSYQWVEKEIVFRPKLKTWQSAVRDGLLEAGVTPYNGFTLDHAKGTKIGGSTFDGSGRRHTSADLLRYARPSNIKVAVYATVERLLLAGSSAIGALYRDQRGRHHHAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSLPLDHSLIQVVGITDSGAYIEAASNVVPFISPRHNAFVRSPLYLTVATLISKISGPLSAGFLRLASTDVDANPRVRFNYFDNLVDLERCVNGTRKIAEILRSRALKDFKFSNWFGEQDFRFIGPALPLHQTDFPRMANFCRRTVSTIWHYHGGCVVGRVVDPHLKVIGMDSLRIVDGSVFSVSPGTNPQATLMMLGRYFGFKIITERNDYK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00042 549 Pfam GMC oxidoreductase 394 535 IPR007867 GO:0016614
Phco1g00042 549 PANTHER OSJNBA0019K04.7 PROTEIN 24 545 - -
Phco1g00042 549 PIRSF Alcohol_oxidase 369 549 IPR012132 GO:0050660
Phco1g00042 549 PIRSF Alcohol_oxidase 35 365 IPR012132 GO:0050660
Phco1g00042 549 SUPERFAMILY FAD-linked reductases, C-terminal domain 325 491 - -
Phco1g00042 549 ProSitePatterns GMC oxidoreductases signature 1. 133 156 IPR000172 GO:0016614|GO:0050660
Phco1g00042 549 Gene3D - 180 484 - -
Phco1g00042 549 Gene3D - 60 534 IPR036188 -
Phco1g00042 549 ProSitePatterns GMC oxidoreductases signature 2. 288 302 IPR000172 GO:0016614|GO:0050660
Phco1g00042 549 Pfam GMC oxidoreductase 60 328 IPR000172 GO:0016614|GO:0050660
Phco1g00042 549 SUPERFAMILY FAD/NAD(P)-binding domain 43 347 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00042 Phco-Chr1 362542 364352 Transposed