Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00038 ATGAAGGAGAAGGACAAAGAGAAGGAGACGGAGAAGAAGAAGTATCCCATCGGAGCTGAGCATTACCTTCTATATGAAGAGATTGGTCAAGGCGTCAGCGCTTCTGTTCACCGCGCCCTCTGCGTTCCCTTCAATGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGATAATTGCGATCTGAACAACGTGTCTCGTGAGGCACAGACAATGATCCTGGTGGACCACCCTAACGTGCTTAAATCACACTGCTCCTTCGTCAGCGAGCACAATCTGTGGGTTGTCATGCCTTATATGTCTGGCGGATCATGCCTTCACATACTCAAAGCCGCGCATCCCGACGGGTTTGAGGAGGTTGTGATTGCCACCATTCTCAAAGAGGTGTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCTGGCAACATTCTCATTGATTCACGTGGCGCCGTCAAGCTTGGCGATTTTGGTGTCTCCGCTTGCCTCTTTGATTCTGGTGACCGCCAACGCACGAGGAATACATTTGTTGGAACACCTTGCTGGATGGCCCCCGAGGTCATGGAGCAAATCCACGGCTATAACTTCAAAGCTGACATTTGGTCATTTGGTATTACGGCCTTGGAGCTTGCTCACGGTCATGCTCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTTTGCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAAGAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCTAGCTGCTTGGTAAAAGATCCTACAAAACGACCCTCTGCAAGCAAGTTGTTAAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAATGATCATATTCGAAGGCTCTTGGAGGGGCTGCCTGCTTTAGGTGATCGAATGGAGGCCCTGAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCCATGATTTCGATGATGTTATGTCCGATATGAATCACGCAGCAAGTTCAAGTTCTTTATCTACACTTGATTCGCAAGAGAAACAATTACCGAGTGCATTTCACAACCCTTCTCGATCTGTTGATATGGAAGAAAATGATGAGACGCGAAATCAATCAGCTTCTGTTTCTGCAATTGATGCCAAAACTAGGCTTGAAAAATCCGATGATGACTCTAGCATCACCAATTCAAGCCATGAACCACAAATTTATTCATCCTCTTTCGATGATCACGTAGACAGTAATTTGGGTGAGAAATCTGACATGGAAAACGGTGGAAAATTTGTGGAGGGAATGTCCACCCTTCATTATCATAGAAGAGGATGTTCATCAAGCATCTTACCAGAAGTTACCCTTCCACCAATTCGACCAGAAAGTGAGAAACTACAAAATCTGCCCCAGAACGGTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTACTTACTGAACTTCCATCAAGAGTCTCAAGATCATCAGTTAATTCTGATGACACTGATGAGAAATCGAAAGTGCCAGTTGTACAGCAAAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTGTACTGCAAAAGAGTCATAGCATGCAGGTTTTTAGCCAGCATAATGTTGCTTCTGTACAACCAACTTTGCCATTATTACCTGCATCTGAAGCCACATCATCAAATCTTTCGGGCCAAGCTGTGTTTCCTATGTTGCACTCTGTACTGCAGACAAATATTCTTCAACAGGAAAGCATTTTATGTTTGATGAAGCTTATTACTGCCGGTGACTCTACAGCTGATGGCTCAAGTACCCTAGCACAAATAGCAGGAGCTGAAAAATCTTTGCTTGAAGCAGCTCAGGATAGGGAGAAGGAGTTACTTCATGAGATAACTGATTTGCAATGGAGGCTTATCTGTGCTCAGGAGGAGCTTCAAAAATTGAAAACAGAAAACGCCCAGTGTGGAATGGATGGAGGCGGGAGTAAGGAAAAAAGGGTGATAGAGTAG 2133 0.4519 MKEKDKEKETEKKKYPIGAEHYLLYEEIGQGVSASVHRALCVPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSEHNLWVVMPYMSGGSCLHILKAAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQIHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPTKRPSASKLLKHSFFKQARSNDHIRRLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMKAQASLIHDFDDVMSDMNHAASSSSLSTLDSQEKQLPSAFHNPSRSVDMEENDETRNQSASVSAIDAKTRLEKSDDDSSITNSSHEPQIYSSSFDDHVDSNLGEKSDMENGGKFVEGMSTLHYHRRGCSSSILPEVTLPPIRPESEKLQNLPQNGSSCNATSVPQTGEDVLTELPSRVSRSSVNSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVFSQHNVASVQPTLPLLPASEATSSNLSGQAVFPMLHSVLQTNILQQESILCLMKLITAGDSTADGSSTLAQIAGAEKSLLEAAQDREKELLHEITDLQWRLICAQEELQKLKTENAQCGMDGGGSKEKRVIE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00038 710 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00038 710 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Phco1g00038 710 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 335 - -
Phco1g00038 710 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Phco1g00038 710 Gene3D Transferase(Phosphotransferase) domain 1 103 336 - -
Phco1g00038 710 MobiDBLite consensus disorder prediction 494 544 - -
Phco1g00038 710 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 691 IPR047173 GO:0043539
Phco1g00038 710 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Phco1g00038 710 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00038 710 MobiDBLite consensus disorder prediction 373 460 - -
Phco1g00038 710 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Phco1g00038 710 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00038 710 MobiDBLite consensus disorder prediction 496 518 - -
Phco1g00038 710 CDD STKc_OSR1_SPAK 20 283 - -
Phco1g00038 710 MobiDBLite consensus disorder prediction 430 446 - -
Phco1g00038 710 Coils Coil 658 692 - -
Phco1g00038 710 MobiDBLite consensus disorder prediction 373 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00038 Phco-Chr1 338454 345661 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phco1g00038 Pkinase 1.6e-59 CL0016