Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00014 | ATGGATAGAAGCCAGAAGGGAGCCCTCATGAGCAATGAAAGCACTAAAGATTTATCAGTTATGGTTCTCAAACAGCAGCAGTACAAGAAGAAGCAACCTCAATTAAGCTCTACTCCGGACGAGACACATAATCAATCCCATTGTCTTATCTGTAGGGGGGGAAACAGTTGCCAAACAGTTCTTTCAAGAACAAAACTGATGAATACTTTGATTGGAAAAGGGAAGCCACACGAAGCTCAGACCGTCTTCAACAATTTGACTGAAGAAGGACATAGGCCTACTCTCATAACATACACAACTCTTGTGGCCGCTCTAACCCGCCAAAAGCGTTTCAAGTCTATTCCTGCAGTTCTCTCTAAAGTTGCAGACAATGGGATGAAGCCGGATTCAATACTTATCAATGCCATGATCAATGCGTTTTCTGATTCTGGCAAGGTAGATGAAGCCATGAAAATATTTAAGAAAATGAAGGAGTATGGATGTAAACCAACAACCAGTACTTATAATACCCTCATTAAGGGGTTTGGCATTGCTGGAAGGCCTTACGAGGCTATGAAATTGTCAGAGATTATGGGACAGGATGAAAATGTGAAAGCCAATGATAGAACATATAACATTCTCATTCAAGCCTGGTGTACCAAGAAAAAACTGGAAGAAGCATGGAATGTTATGCATAAAATGGTGGCTTCTGGCATTCAGCCAGACGTGGTCACATATAACACGATGGCAAGGGCATATGCTCAGATTGGTGAAACAGAAAAAGCTGAAAGATTAATATTGAAAATGCAGTACAACAAAGTAAAACCTAATGAACGAACTTGTGGTATCATAATAAGTGGTTACTGCAAGGAAGGCAATATGACAGAAGCCTTGAGGTTTCTATACGTAAGAATGAAGGAGCTTGGTGTGCATCCAAATCCAGTAGTTTTCAACTCGCTTATCAAAGGATATCTAGACATTAAAGACACAGATGGAGTAGATGAGGCACTGGCATTGATGGAAGAATTTGGGATCAAACCAGATGTGGTGACATTTAGCACAATCATGAATGCATGGAGTTCTGCAGGGCTTATGGATAATTGTGAGGAGATATTCAATAACATGGTCAAGGCCGATATAGAACCTGACATCCACGCATATAGCATCCTTGCAAAAGGATATGCACGTGCTGGACAGTCACAAAAAGCTGAGGCTCTTCTGACTTCCATGAGCAAATATGGTGTACAACCAAATGTGGTGATCTTCACTACCATCATCAGTGGATGGTGTGCAGAAGGAAAAATGGATCGCGCCATTAGACTTTATGAGAAAATGCATGATGTGGGAATTCCCCCAAATTTGAAAACTTATGAAACCTTAATATGGGGATATGGAGAAGCAAAACTACCATGGAAAGCAGAAGAGTTACTTACAACTATGGAAGAGAGGGGTGTTGCCCCTGAAACATCCACTGTGCAACTGGTTGCTGATGCTTGGCGTTCCATTGGTTTATTCAAAGAAGCCAACAGAATTCTAAATGATTCAGAAGAAGAGGAATGTGAGTTAGATAAAAAAATTGATAGTGAAAATATACCGGTGCAAAGCTTGGAGAGGATTTATACGAGACAGAAATTCAGTGCATCTCACTCTAATATGCTTCAAATACCTGATGTAGTGGTACCTCATCCAGAAAGAACAACTAATGGCAACATAAGAAGCCAAATGGTTGTCAAAGTATCTGACAACATGCGAAACATTACCACTTCCATGTTTTTGGTTCGTACAACAAATTCATATGGAGTACAAGCACATATTGTAAGTAAACAGCAGATTCAAAATCAGGTTGTTAGGCCTTTCCTTGACTATTGCGGAGTAGTGTCAATACTTTGTTGA | 1872 | 0.4028 | MDRSQKGALMSNESTKDLSVMVLKQQQYKKKQPQLSSTPDETHNQSHCLICRGGNSCQTVLSRTKLMNTLIGKGKPHEAQTVFNNLTEEGHRPTLITYTTLVAALTRQKRFKSIPAVLSKVADNGMKPDSILINAMINAFSDSGKVDEAMKIFKKMKEYGCKPTTSTYNTLIKGFGIAGRPYEAMKLSEIMGQDENVKANDRTYNILIQAWCTKKKLEEAWNVMHKMVASGIQPDVVTYNTMARAYAQIGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYVRMKELGVHPNPVVFNSLIKGYLDIKDTDGVDEALALMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNNMVKADIEPDIHAYSILAKGYARAGQSQKAEALLTSMSKYGVQPNVVIFTTIISGWCAEGKMDRAIRLYEKMHDVGIPPNLKTYETLIWGYGEAKLPWKAEELLTTMEERGVAPETSTVQLVADAWRSIGLFKEANRILNDSEEEECELDKKIDSENIPVQSLERIYTRQKFSASHSNMLQIPDVVVPHPERTTNGNIRSQMVVKVSDNMRNITTSMFLVRTTNSYGVQAHIVSKQQIQNQVVRPFLDYCGVVSILC | 623 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 446 | 480 | IPR002885 | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 129 | 163 | IPR002885 | - | |
| Phco1g00014 | 623 | Gene3D | Tetratricopeptide repeat domain | 404 | 474 | IPR011990 | GO:0005515 | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 270 | 305 | IPR002885 | - | |
| Phco1g00014 | 623 | SUPERFAMILY | HCP-like | 138 | 475 | - | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 306 | 340 | IPR002885 | - | |
| Phco1g00014 | 623 | Pfam | PPR repeat family | 273 | 317 | IPR002885 | - | |
| Phco1g00014 | 623 | Pfam | PPR repeat family | 128 | 175 | IPR002885 | - | |
| Phco1g00014 | 623 | Pfam | PPR repeat family | 202 | 247 | IPR002885 | - | |
| Phco1g00014 | 623 | Pfam | PPR repeat family | 410 | 457 | IPR002885 | - | |
| Phco1g00014 | 623 | Pfam | PPR repeat family | 340 | 389 | IPR002885 | - | |
| Phco1g00014 | 623 | Gene3D | Tetratricopeptide repeat domain | 293 | 403 | IPR011990 | GO:0005515 | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 200 | 234 | IPR002885 | - | |
| Phco1g00014 | 623 | Gene3D | Tetratricopeptide repeat domain | 178 | 292 | IPR011990 | GO:0005515 | |
| Phco1g00014 | 623 | Gene3D | Tetratricopeptide repeat domain | 53 | 177 | IPR011990 | GO:0005515 | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 411 | 445 | IPR002885 | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 235 | 269 | IPR002885 | - | |
| Phco1g00014 | 623 | PANTHER | OS01G0228400 PROTEIN | 2 | 619 | - | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 341 | 375 | IPR002885 | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 94 | 128 | IPR002885 | - | |
| Phco1g00014 | 623 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 376 | 410 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 413 | 446 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 308 | 342 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 133 | 164 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 379 | 412 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 343 | 377 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 203 | 236 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 237 | 271 | IPR002885 | - | |
| Phco1g00014 | 623 | NCBIfam | pentatricopeptide repeat | 273 | 306 | IPR002885 | - |