Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00010 ATGCTCCAGACAGAGGTATACCTTAGTTTCACCAATGCTCCGATAGCAGTGATTGTTTTTGTGAATGGAATACACAAGACCGTCTCCTTCCTTTGCTCCACTCAGTCTCCTTCTTCTTCACTGTCAGTCTCGTTGCTCTTTCTCAGTGGTGCTCGTTCTCAGTCTCGGTCTCACTCTCAGTCTCGTTCAAGTGGTTCGTCTCACTATCTCGTTCCTCGCTCAAATCCAGTCTCGCTCGTTCTCGCTCAGTCTCGTTCACGCTCAGTCTCGTTCAATTGGTTCGTCTCACTGACTCGTTCCTCGCTCAAATCTAGGTACTTGAATCTGTTCTTCAGTATCACAGGTTTCAAGTTGTTCTTACAATTAGAGGTGGAAGATTGTGTTGATAAGATGTCTCAGGATGTGAATATGCTAATTGATGGGACAACAAATAAGTCTGTGGATTGTAGTGATGCATTTAACACTACAGAGGTTTTTCCTTCTCGAGATGCAATGTTAAGTTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAACCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTATAATTTTGGGTTGTGATAGAAGTGGAAAATATAGAGGACCACACAAAAATGCATTATCCCGAAAGGTAAATGGTACTAGAAAATGTGAGTGTCCCTTCAGGTTAAGGGGAAAAGCTTTGAAAAAGTCTGAAGGATGGATTGTTAAGGTAATGTGCGGTTGTCACAATCATGACTTAGAGGAAACATTAGCGGGTCATCCATATGCAGGCCGGTTGAGTGCTGAGGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACGTTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCTCGACATGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTACTGAAATTATTGGAACGTAAGCGGTATGTGTATTGGCATAGAAAGGTGGATGATTCCAATGTCATCAGAGATATATTCTGGACACATCCTGATGCCATAAAACTTCTGGGTGCTTTCAATACAGTCTTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCATTGCTTGAGATTGTTGGCGTTACTTCAACAGACTTAACATTCTCTGTGGCATTTGCTTTTGTGGAGTCTGAGCGAGCTGACAACTTCACTTGGGTACTACAAAAGTTAAGAGGATTGATTGTTAAAGATGAAGACACACCTCAGGTGATTGTGACTGACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTACTAATTTGTTATGTCGGTTTCATATCAACAAGAATGTGAAGGCCAAATGCATGTCGATAGTCCGTCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTTTGAATTCTTCTAACGAGAGTGAATATATGCAGCGTTTGGCATTATTTGAAAAAGTTTGCTCAGGTTTTCCTAGTTTTGGTGAATATGTGAAAAATATGTGGCTGATCCCACACAAGGAAAAGTTTGTCACTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCAATAGGGTTGAGGCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGAATAATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACAGAGATTAAGTCGTCATTTGAGAAAAGCTTAAATGTAGTGGATCATATGCATAATACTCCAGTATACATCAAACTGCAAGGATTTGTATCGAGGAGTGCATTGAGTCATATAACTGACGAGTATGATCGAGTTAAGACTGTTTGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTTCTAGGTACAGTACTATGCGCCATCCTATTCCCTTGGAGGCAATTCATGTTCATTGGAAGAAGTTAAACTTTATTGATCGAGGAATGGATGACAAGGAGTTTGAGTTATCACTGCAACCTGAGTTGGATGCTCTGCTCCAGAGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAATTGCATGAACTAGCATTTCCTGATACAACTTCAAAGTGTCCAACTCCTAAAGTGGTAAGAATAAAGGGTGCTCCAGGGTCAAAAAGAGATAGATCAATTCATTGTGATCTTTCACATCGGGAGCATGTTGATGCAATGCATCCTACCCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTAGTCCATGATTCTAAACGAAGAAGAGTTGTGCCAATGATGGACCAATTTCCGATTCAGATCCATCCGTTTATTGAAGAAATTATCGATGTGAAAGCAGATTCAAATTGTGGTTATCGTGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATTTACGCCAAACTCTTTGGTAGCAATGATCGTGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTATTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATATAACGTGGTTCTAGTCTCTTTATCCTTGAAGGAGTCCATGACATTCTTCCCTCTTAGAGGACGACCACCATTATCTCAGTCAAGGCACCGCCTTATTGCCATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGAGTCTGCATTACCTCCCACTGCTTTGCAATGGTCGAGATACTGCAGTGCTGAATCCCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACACAAAAAAAATGATTATGTAAACGTTATTGAGGACTAA 2994 0.3995 MLQTEVYLSFTNAPIAVIVFVNGIHKTVSFLCSTQSPSSSLSVSLLFLSGARSQSRSHSQSRSSGSSHYLVPRSNPVSLVLAQSRSRSVSFNWFVSLTRSSLKSRYLNLFFSITGFKLFLQLEVEDCVDKMSQDVNMLIDGTTNKSVDCSDAFNTTEVFPSRDAMLSWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFIILGCDRSGKYRGPHKNALSRKVNGTRKCECPFRLRGKALKKSEGWIVKVMCGCHNHDLEETLAGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARHAYRSSQKGLEMQYLLKLLERKRYVYWHRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTDLTFSVAFAFVESERADNFTWVLQKLRGLIVKDEDTPQVIVTDRDISLMNAVQVVFPSSTNLLCRFHINKNVKAKCMSIVRPKEKQDLVMDAWDVVLNSSNESEYMQRLALFEKVCSGFPSFGEYVKNMWLIPHKEKFVTSWTNQVMHLGNTTTNRVEATNCKLKNLLQDSKNNMCSYWDAMNDMITLQHTEIKSSFEKSLNVVDHMHNTPVYIKLQGFVSRSALSHITDEYDRVKTVCTDSSKCCCIVRTTHGLPCACELSRYSTMRHPIPLEAIHVHWKKLNFIDRGMDDKEFELSLQPELDALLQRFQELDCAGKIILKAKLHELAFPDTTSKCPTPKVVRIKGAPGSKRDRSIHCDLSHREHVDAMHPTHSGTSSCPSSHQLVHDSKRRRVVPMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVSLSLKESMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAESALPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPHKKNDYVNVIED 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00010 997 CDD OTU 812 940 - -
Phco1g00010 997 ProSiteProfiles OTU domain profile. 811 946 IPR003323 -
Phco1g00010 997 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 156 681 - -
Phco1g00010 997 Pfam MULE transposase domain 375 471 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00010 Phco-Chr1 147335 156294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco1g00010 MULE 1.3e-23 CL0219