Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco17g00086 ATGTGTCATAATTCAGCTTCCACATCTTCGGACAGGGAGAACTTCTGTTTTTTCAGAGTATATCTTGGTCTGTTAAGACTGTTACTAGGTGGAGATTCCTTGATCTATTCCAAGGGGCAAGAGAAAAAAAGTGTAAAGATGGGTTATATATGTGATTTTTGTGGAGACCAGAGATCCATGGTGTACTGCCGCTCTGATGCTGCATACTTATGTTTGTCTTGTGATCGGAATGTTCATTCTGCTAATGCCCTTTCCAGGCGTCATTCACGCACCCTTTTGTGTGAGAGATGCAATTCACAACCTGCCTTTGTGAGGTGTGTTGAAGAGAAAATTTCACTGTGTCAGAATTGTGATTGGTTGGGTCACGGAGTCTCTACATCTTCAACACACAAGAGACAAGCAATCAGTTGCTACTCTGGCTGCCCTTCAGCGGCGGAACTGTCTTCAATATGGTCATTTGTGCTGGATATCCCTTCCATTAGAGAGTCTACATGTGAGCAAGAACTAGGCTTAATGAGTATTAATGAGAACAACAAGAGTGTTGGAGTTCCACCTGAAAATGGGAATGTGTCTGGTTCAGATCAAGTTACTGATCTACCTTCTTTGGACAAGTCTTTGGTTGGTACATCTTCAGTACCCGAGTCAAGCTCCGAACCTCCAGCTGGACCTGCCAATGAATGTCTGCCAAAGTTGTACTGTCCTGCTGCAAAATGCCCTGCATTATGTGAAGATGATAATCTATATGATGATTTTGACATGGATGAAATGGATCTAAATCTTGAGAACTATGAAGAACTTTTTGGTGTGGCCCTCAGTCATTCCGAAGAGCTATTTGAAAATGGTGGATTTAATAGTTTGTTTGGGACAAAAGACATGTCTGCAGGAGATTCCAGTTGTCAGGATGCCATTGCTGCCGAGGGGTCATCAGTTGGACTTGTCAATGCAACACAACCGGCTTGCAGCAACGCAGCATCTGCAGATTCCATTTTGAGTACTAAAACCGAACCGATTCTTTGTTTGACGGGGAGGCAAGCTCAATCAAACCTTTCTTTTTCTGGCATTACCGCAGAGAGTAGTGCTGCAGACTATCAAGACTGTGGGGCTTCTTCCATGCTTCTCATGGGAGAACCTCCTTGGTTTGCTCCTTGTCCTGAGAATTCCTTACAATCTGCCAACCGCAGCAACGCTGTCTTGCGCTACAAGGAAAAGAAGAAGGCGCGAAAGTTCGAAAAACAAGTGCGGTATGCCTCTCGCAAGGCAAGGGCCGATGTCAGAAGGCGGGTGAAGGGCCGGTTTGTGAAAGCTGGTGACGTCTACGATTATGACCCTTTGAGCACAACCAGAAGCTACTGA 1353 0.4501 MCHNSASTSSDRENFCFFRVYLGLLRLLLGGDSLIYSKGQEKKSVKMGYICDFCGDQRSMVYCRSDAAYLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCVEEKISLCQNCDWLGHGVSTSSTHKRQAISCYSGCPSAAELSSIWSFVLDIPSIRESTCEQELGLMSINENNKSVGVPPENGNVSGSDQVTDLPSLDKSLVGTSSVPESSSEPPAGPANECLPKLYCPAAKCPALCEDDNLYDDFDMDEMDLNLENYEELFGVALSHSEELFENGGFNSLFGTKDMSAGDSSCQDAIAAEGSSVGLVNATQPACSNAASADSILSTKTEPILCLTGRQAQSNLSFSGITAESSAADYQDCGASSMLLMGEPPWFAPCPENSLQSANRSNAVLRYKEKKKARKFEKQVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSTTRSY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco17g00086 450 ProSiteProfiles Zinc finger B-box type profile. 89 135 IPR000315 GO:0008270
Phco17g00086 450 ProSiteProfiles CCT domain profile. 393 435 IPR010402 GO:0005515
Phco17g00086 450 MobiDBLite consensus disorder prediction 176 222 - -
Phco17g00086 450 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 48 437 - -
Phco17g00086 450 SMART bboxneu5 94 135 IPR000315 GO:0008270
Phco17g00086 450 SMART bboxneu5 46 93 IPR000315 GO:0008270
Phco17g00086 450 CDD Bbox1_BBX-like 93 135 - -
Phco17g00086 450 MobiDBLite consensus disorder prediction 176 218 - -
Phco17g00086 450 Pfam CCT motif 393 435 IPR010402 GO:0005515
Phco17g00086 450 CDD Bbox1_BBX-like 50 93 - -
Phco17g00086 450 ProSiteProfiles Zinc finger B-box type profile. 46 93 IPR000315 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phco17g00086 CCT 2.2e-15 CL0281