Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco17g00018 ATGGGAGGGACTCATGAACAAAGCCAAAACTTCTCCACCAACCCTTCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACAGAGCCATCTATCTTCCCTTCAACCAACTGGTTGCCGTCAAGTGCTTGGATCTCGATCGCTGTGACATCAATCTCGATGATTTGCGAAGGGAGGCGCAGACGATGAGTCTGGTCGATCATCCGAACGTGGTGAAGGCATACTGCTCCTTCGCGGTGGAGCGGAGTCTGTGGGTGGTGATGCAGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGATTGCGTACACGGAAGGGTTCGAGGAGGAGGCAATCAGATCCATCCTCAAAGAAACTCTGAAGGCCCTGCAGTACCTCCACCACCACGGCCACATTCATCGGGACGTCAAGGCCGGCAACATTTTACTCGGCAGCAACGGCGCGGTCAAGCTCGCCGACGTCGGTGTTGCTACTTGCTTGTTCGACGCCGGCGACAGGCAGCGCTGCAGAAACACTTTTGTCGGGACCCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCTTCAAGTGGCTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGTCATGCCCCGTTTTCAAAATACCCTCCAATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCTGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCCAGCTCTCTGTAAAAAAGCTATTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGACGCAGCTCAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCACTATCTCAGAGTCAATACCAACGAGGAGTTAGCGCGTGGAACTTCGATATTGATGATTTAAAAGCTCAAGCTTCATTGGTGAGGAATGATGATGATATTTCTGAGATGAGGGAAGAAGATGAAAACAATTTTTTCACCAATTACAAGGCTGGTGCAATTGATTCCCAGTCTAGTAATGGCAAAATGAATTTAGAGAAATCACCAATGAATAAGATCACATCACAGGAAGGGGCTATTGACATAGAAGAGACTGAGCAAAGTGAATACTTAAACAAAAACAAAAAGATTCCAGAAAGCGAAATCCAGGAACTTGGATTTCCCAAAAATATTTTTTGGGAAAGAAATGTGTCAACTTCGAAAGCAACGGCATCTAATGTAGAGAAAGATATAATTATGACCAAAACTAAAGGCCAAATGGTAAAAAGCCGTCAAACCCATAGTGGACCACTCTTGCCAGTCACAATTCTCAATCATTCGAAATTAGAAAGGGAAGGGATATCAACAAGGCTTGAGAATGGAAATCAGGTACTGGATAAGAAAAATAATCGTGAAGTGCGACGACCTCCAAATTTTAGCGGTCCATTGATGCTTCCACCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGATTCAGGGATTCCTTGGATGACAAGTCTAAGGCTAATCAAGTACAAGTTAAAGGGCGATTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAAATAGTCAGGGCACCAAGGATTCTGCCACCAACAATATCTCTGCATCACTTCTTTTGACTCACCTTCAAAATCTTCTCCAGCAAACATCAATGCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAATCTGCTGAAGGGATTGAAGTTTCACAGAATGGAAAGTGGCCACCTATTCCTTGCAGTTCAGAAATTAATGGGAGTGTTGACACAGCAGCTGCAGAGAGGGAACGTCTTCTGCTGCTCAAAATTATAGAGCTACATAATCGGATGATGACTTTGACTGATGAATTGACCGCTGAGAAGTTAAAATACATGCGGTTGCAACAACAGCTAACGGCTCTCCAAACTAAGGAACAAAATAGGGACAAGCTGATTAATCCTGATCTTCTTTAA 2178 0.4449 MGGTHEQSQNFSTNPSDYKLLEEVGYGATATVYRAIYLPFNQLVAVKCLDLDRCDINLDDLRREAQTMSLVDHPNVVKAYCSFAVERSLWVVMQFMDEGSCLHLMKIAYTEGFEEEAIRSILKETLKALQYLHHHGHIHRDVKAGNILLGSNGAVKLADVGVATCLFDAGDRQRCRNTFVGTPCWMAPEVLQPSSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPQLSVKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEALSQSQYQRGVSAWNFDIDDLKAQASLVRNDDDISEMREEDENNFFTNYKAGAIDSQSSNGKMNLEKSPMNKITSQEGAIDIEETEQSEYLNKNKKIPESEIQELGFPKNIFWERNVSTSKATASNVEKDIIMTKTKGQMVKSRQTHSGPLLPVTILNHSKLEREGISTRLENGNQVLDKKNNREVRRPPNFSGPLMLPPRASANSLSAPIKSSGGFRDSLDDKSKANQVQVKGRFSVTSENLDLVKGSSLRKSASVSDWMLDSKQMPNSQGTKDSATNNISASLLLTHLQNLLQQTSMQQDLIMNLLNSLQSAEGIEVSQNGKWPPIPCSSEINGSVDTAAAERERLLLLKIIELHNRMMTLTDELTAEKLKYMRLQQQLTALQTKEQNRDKLINPDLL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco17g00018 725 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco17g00018 725 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Phco17g00018 725 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco17g00018 725 SUPERFAMILY Protein kinase-like (PK-like) 16 334 IPR011009 -
Phco17g00018 725 CDD STKc_OSR1_SPAK 16 279 - -
Phco17g00018 725 Coils Coil 685 712 - -
Phco17g00018 725 Gene3D Transferase(Phosphotransferase) domain 1 99 329 - -
Phco17g00018 725 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Phco17g00018 725 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco17g00018 725 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Phco17g00018 725 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Phco17g00018 725 MobiDBLite consensus disorder prediction 531 553 - -
Phco17g00018 725 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 696 IPR047173 GO:0043539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phco17g00018 Pkinase 7.4e-59 CL0016