Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco16g00022 ATGGAGCCGGAGCCCACGTCTGGGCCCGGGCCTGAGTTTAATTCCAAGGAGGAAGCTTTCGCATACTACCAAGCCCACGCGAAATCCGTGGGTTTCTCCGCCATAATCAAAGCCAGCCGGCGATCCCGAATTTCCGGCAACTTCATCGACGCCAAATTCGCCTGCACTCGCTACGGCGCCCCACCAAGCCCGCATAAACCCAAACGGGCCCGAGCCCGGGCCAAAACCGATTGCAAGGCCTCTATGCACGTGAAACGAACACCCCACGGTACATGGATCATCTCTTCTTTCATCAAACACCATAACCACCAAATTTTCCCCATTCACAGTAACCCTAAACCCAATAATAATGATAACAACAACGCAAGTCCCTCAAGGAAACCGAAGGTTAAAAAAACACTGCAACACTTAGCTTTCGTCCAAGGTGACCTTCAATTTTTGCTTAACACCTTCATGTCTATGCAAAACGAAAACCCTAATTTTTTTTTCGCGGCCGATTTTAACGAGGCACAGCGGTTGAGGAGTGTTTTCTGGGTGGATGCTAAGGCCAGGCTTGATTATAGACACTTTAGCGACGTGGTGCTTTTGGACACCACTCACGTTAAAAACGAGTGTAGATTGCCCTTTGTTCCTTTTGTTGGTGTGAACCACCATCTTCAGTTTTTGTTGCTGGGGTTGGCTTTTGTGTCTGATGGGTCTGAATCTGCGTTTGTGTGGCTGATGAGGAATTGGTTGAGGGCAATGGGGGGACATGCTCCCAAGGTGATCCTCACTGACTGTGGTGAAGTGCTGAAGAGAGCGGTTGCTCAAGTGGTTCCCGAGTCTTTTCATTGCTTTTGTCTGTGGCATGTGTTGAGTAAGGTTCCAGAGAAGCTAGGTCGCTGGGTGCATCAGCATGGTGGGGAGTTTATGAGTGTGTTTAGTGTGTGTGTTTTGAAGTCTAGGACAAAGGAGCAGTTTGAGAAGAGGTGGGGGGAGATGGTTGAGAGGTTTGACATGGGTGATGAGAGTTGGTTGTGTGAGATTTATGACGATCGCAAACAGTGGGTACCTGCATTTTTGAATGGCAGGGTTTTAGCAGGAATGTCGACTGTGCAGAGATCAGAAGCCATGAACTGTCTGTTTGATAAATATGTGCAGAGGAAAACTACTGTGAAAGAGTTTATGGAGCAGTACAGAGTGGTGTTGAGGGATAAGTATGAGGAGGAAGCCAAGGCGGATTTTGAAACGCTGCGTAGACAGCCAGCGTTGAAGTCCCCATCACCTTTTGGGAAACAAATGGTGGAGTTGTACACTCATGCAGTGTTTAAGAAGTTCCAGAGTGAGGTTTTGGGAGCTGTTGCTTGTCATCCAAGGAAAGAGAGCGAAGATGGGGCAACGAAAATTTTTAAGGTTCAGGATTTTGAGGACAATCAAGGTTTTGTTGTGACTTGGAATGAATCGACTTCAGAAGCATCATGCTCCTGCTATTCATTTGAGTTCAATGGCTATCTTTGTAGGCATGTAATGATTGTGCTACAGATTTCTGGTGTGCATAGCATCCCACCTCGGTATATTTTAAAACGATGGACAAAAGATGCCAAGAGCAGACAGACAGAAAGAAATCTGTCTATGGCAGATGTGGTTGTCTCTGACTCTAGGGCTGAGCGTTGTAAAAATTTATGTCAACGAGCTTTTGAATTGGGCGATGAAGGGTCTTTATCATACGAGACGTACATTGCCGCTGTAAAGGCATTGGAAGAAGCTTTGAGAAAGTGTGAGAACCTGAATGGTTCAATTCACAGTGTCAGAGAACCGAACCTTCCATGTTTTGGTTCTCAAGAGGTGAATCTAAGTAATGCTGCTGATCATACTAACAAAAAGGATAGTACTCTTCGAAAAAGAAAGGTAAGCGTTGAACCAGAGATCATTGCTATGGGAGTTGATTCTAGCTGGCAGCAAGTGGAAAACCCCAATGCACAAGCAACTCGTCTTCCTTGTTCATATGAATCACAGCAGAGCATTCAAGAGATGGGTCGGCTGAACTCAAGGGCTCAGAATTTGGATGGCTATTTTGCTACTCAGAGGATTGATTTGGGAATGTGCCACCAATTGAATTCAGTAGCTGCTATTCGTAATGATTATTATAGCAATCAGCATGGCATCCAAGACCGGGGACAGTTGAACTCAATTGCACCCATCCATGATCCTGGTTACATGGCCCCACAAAGGATGTATGCGATGGGTCAAGACGATGGAGGATCATCCTCACAACCGCATGGGATGGAGCTAAAGGTAAAACAGCTAAATTCAAGGCACCAGTCTCGGTAA 2310 0.4619 MEPEPTSGPGPEFNSKEEAFAYYQAHAKSVGFSAIIKASRRSRISGNFIDAKFACTRYGAPPSPHKPKRARARAKTDCKASMHVKRTPHGTWIISSFIKHHNHQIFPIHSNPKPNNNDNNNASPSRKPKVKKTLQHLAFVQGDLQFLLNTFMSMQNENPNFFFAADFNEAQRLRSVFWVDAKARLDYRHFSDVVLLDTTHVKNECRLPFVPFVGVNHHLQFLLLGLAFVSDGSESAFVWLMRNWLRAMGGHAPKVILTDCGEVLKRAVAQVVPESFHCFCLWHVLSKVPEKLGRWVHQHGGEFMSVFSVCVLKSRTKEQFEKRWGEMVERFDMGDESWLCEIYDDRKQWVPAFLNGRVLAGMSTVQRSEAMNCLFDKYVQRKTTVKEFMEQYRVVLRDKYEEEAKADFETLRRQPALKSPSPFGKQMVELYTHAVFKKFQSEVLGAVACHPRKESEDGATKIFKVQDFEDNQGFVVTWNESTSEASCSCYSFEFNGYLCRHVMIVLQISGVHSIPPRYILKRWTKDAKSRQTERNLSMADVVVSDSRAERCKNLCQRAFELGDEGSLSYETYIAAVKALEEALRKCENLNGSIHSVREPNLPCFGSQEVNLSNAADHTNKKDSTLRKRKVSVEPEIIAMGVDSSWQQVENPNAQATRLPCSYESQQSIQEMGRLNSRAQNLDGYFATQRIDLGMCHQLNSVAAIRNDYYSNQHGIQDRGQLNSIAPIHDPGYMAPQRMYAMGQDDGGSSSQPHGMELKVKQLNSRHQSR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco16g00022 769 MobiDBLite consensus disorder prediction 743 757 - -
Phco16g00022 769 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 588 IPR031052 GO:0006355
Phco16g00022 769 Pfam MULE transposase domain 193 286 IPR018289 -
Phco16g00022 769 Pfam FAR1 DNA-binding domain 22 107 IPR004330 -
Phco16g00022 769 ProSiteProfiles Zinc finger SWIM-type profile. 474 510 IPR007527 GO:0008270
Phco16g00022 769 SMART 26again6 485 512 IPR006564 GO:0008270
Phco16g00022 769 MobiDBLite consensus disorder prediction 105 128 - -
Phco16g00022 769 MobiDBLite consensus disorder prediction 108 128 - -
Phco16g00022 769 Coils Coil 569 589 - -
Phco16g00022 769 Pfam SWIM zinc finger 474 506 IPR007527 GO:0008270
Phco16g00022 769 MobiDBLite consensus disorder prediction 738 769 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco16g00022 MULE 2e-22 CL0219