Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco16g00009 ATGAAAACCCTAACCCAAGCATTGGCCAAAACTGCTGCGGTCATAGAGAAGACAGTGCAGACCACGGTGCAGGAGGTCACGGGCCCCAAACCACTTCAGGACTATGAGCTTCTCGACCAGATCGGCTCTGCCGGGCCCGGGCTCGCATGGAGGCTCTACTCGGCCCGAGCCCGTGATCCCGCCCGCCAGCACCAATACCCCCTCGTCTGTGTCTGGGTTTTGGACAAGCGCTCTCTCTCCGAGGCCCGCATGCGCGCGGGCCTCACCAAGGCCGCCGAGGATTCCTTTCTGGATTTGATTCGGACCGATGCCGCCAAGCTCGTTCGCCTCCGGCATCCCGGGGTCGTTCACGTCGTCCAGGCCCTTGATGAGAGCAAACACGCAATGGCCATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACTCTTGCCATTGTTGACAACATTCCTGTTCTTCCTAAAGATCTCAGGGGGATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTGGACTTTCTCCACAACCATGCTCATCTTATTCATCGAGCTATATCACCCGAGAACATTCTTATCACCTTGAGTGGAGCCTGGAAACTTGCTGGATTTGGTTTTGCAGTTCCTGCTACTCAGACCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTCGAGGACTCTATTTTGCCTCTTCAGCCATCACTTAATTACACTGCTCCTGAGTTGGTGAGGAGCACTGGGTCTTCAGCTGGGTGCTCATCTGATATTTTCAGTTTTGCATGCCTTGCCTACCATTTAATTACCCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCATTCTCATCTATCCCATCAGAACTGGTTCATGACCTGCAAAGGATGCTTTCTCCGAATGAGTCTTCCAGGCCAACAGCTATGGATTTTACAGGATCACCATTTTTTCGGCATGACACTAGGTTGCGTGCCCTACGCTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTTTTAAAAGCGTTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTATGTGCAGAACTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTCTAACCATTGCTGAGTCTCAGGACAAGAATGATTTTGAGCAATATACACTTCCAGCTCTTGTCCCTGTGTTGAGCACTGCTGCTGGTGAGACACTGTTACTACTTGTGAAGCATGCTGATCTTATAATAAACAAGACTAGTCAAGAGCATTTAGTTTCTCACGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTTCCAAACAACTAGATGCCCAGCTTGTCAAACAAGTGGTGTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCGGCGGTTAGAGTCAACGCGTTGTTGTGCCTAGGAGACATGGTTAACCGACTTGATAAACATTCTGTCTTGGACATCTTGCAAACAATTCAACGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTGGGGGTTGCAAATTCTATTTTCAAGCAGTACGGAGTAGAATTTGTAGCAGAGCATGTTCTTCCATTGCTTATGCCCCTCCTGTCTGCTCAACAATTGAATGTCCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATGCCAGAGGTAAAACGGTCTCCCATGATTAATGGTCTTCAATCCGAAGCCCTGCAGACAAGCAGCAGTTCTGCTGTGCCTTCTTCAACAAAAAGCAGCGCCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAGAGCTCTGCCTCTTCTACCGAGAATTCTATTGATGCAGCCAGTCCATCTATGGCAAGAATCCCTGTGGGTCAAGTAACATCTTTACAAAAGCATTTGTCTTTAGCTGCTTTGTCTGCTCAGCAAACAACCAAGTCGTGCCCCTCAGTAGATGTAGAATGGCCACCTCGGGCATCTCCTAGTGTTACCCCACAATTTAGTGATACTGAGAAGCAGACAACTGGAGCAGGAACTTCATCCACATTTAATCTTGAACCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCATTATCAGGTGGATCTGGAATACCGAACAATGGTACTTCAGGAATGCCACTAAACATTGGGCTTAATTCAATGACAAATACTTCAAGCAATATTGGTCCCCAAACTAGCTTGAGCTGGTCTGTTAGTTCCCAAAGTTCTACAGATTCCATTAGTTTGAACTCAAGGACTAGTTCCACTATGGGTAGCCTGAATAGTGGCCTTGGGCCTCAGAATTCTCTTGGCTTCCTAAAACAAAGTCAAGCTTTGCCAGCATCTAATGTTTCATACAATAATGTTCAGTCAAAAGCAACAGATATAGGATCAATATTTTCTTCCAACAAGAATGAACACATTGCGCCTAAACTTGCACCACCCCCATCATCTGCAGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGCGTCAACCACTAGGTCCTCTCACACTAAGTCACACGCTGAGCAGCCACCCCTTTTGGATTTGTTAGGGTAA 2775 0.4703 MKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPARQHQYPLVCVWVLDKRSLSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKHAMAMVTEPLFASAANTLAIVDNIPVLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENILITLSGAWKLAGFGFAVPATQTSGDSSNLQPFHYAEYDVEDSILPLQPSLNYTAPELVRSTGSSAGCSSDIFSFACLAYHLITRKSLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVHDLQRMLSPNESSRPTAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQYTLPALVPVLSTAAGETLLLLVKHADLIINKTSQEHLVSHVLPMIVRAYDDNDARLQEEVLKKSVSLSKQLDAQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLSAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGMPEVKRSPMINGLQSEALQTSSSSAVPSSTKSSASWDEDWGPKTKSSASSTENSIDAASPSMARIPVGQVTSLQKHLSLAALSAQQTTKSCPSVDVEWPPRASPSVTPQFSDTEKQTTGAGTSSTFNLEPDDPFADWPPRPNGSLSGGSGIPNNGTSGMPLNIGLNSMTNTSSNIGPQTSLSWSVSSQSSTDSISLNSRTSSTMGSLNSGLGPQNSLGFLKQSQALPASNVSYNNVQSKATDIGSIFSSNKNEHIAPKLAPPPSSAVGRGRGRGRGAASTTRSSHTKSHAEQPPLLDLLG 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco16g00009 924 SUPERFAMILY Protein kinase-like (PK-like) 30 343 IPR011009 -
Phco16g00009 924 SMART serkin_6 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco16g00009 924 MobiDBLite consensus disorder prediction 728 753 - -
Phco16g00009 924 MobiDBLite consensus disorder prediction 712 833 - -
Phco16g00009 924 MobiDBLite consensus disorder prediction 770 833 - -
Phco16g00009 924 CDD PK_SCY1_like 41 342 - -
Phco16g00009 924 Pfam Protein kinase domain 100 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco16g00009 924 ProSiteProfiles Protein kinase domain profile. 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco16g00009 924 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 32 915 - -
Phco16g00009 924 SUPERFAMILY ARM repeat 343 604 IPR016024 -
Phco16g00009 924 Gene3D - 344 617 IPR011989 -
Phco16g00009 924 Gene3D Transferase(Phosphotransferase) domain 1 157 343 - -
Phco16g00009 924 MobiDBLite consensus disorder prediction 641 684 - -
Phco16g00009 924 MobiDBLite consensus disorder prediction 877 924 - -
Phco16g00009 924 MobiDBLite consensus disorder prediction 641 682 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Phco16g00009 Pkinase 1.1e-23 CL0016