Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco126g00001 ATGACCATCTTCACTTTCACCCTCTTCTTCCTCCTTCTCTACTTCTGCGTACACCTCCAGGCCTACACCCCGGAGGAAATTTTCACCATCAGTTGCGGCACCACCGGCAATTCCTCCGACGGTCAAAGAAGGTGGACCGGCGACGAAGACACAAAGTACTTATCTTTCCAAGACGCCACCGCTTCAGAGAAGGCATCAACACAATCTCCTTCCACCAATCAAATCCCATACTCCAGTGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGTCCCAAATTCCTTCGTCTCTTCTTCTACCCTTCCGACTACCCTTCCTTTCCCCGCAACCAAGCTTCTTTCACCCTTCAATCCAACCAATTCACTCTCCTCAACGCTTTCAACGCCTCTCTTAACGCCGACGCTCAAGCCACTCAGACTATCTTCCGAGAATACGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACTAGATGATATAGGATTCACGCTAGTGGGACATGGTACGCTACTCAGCGTTGGAACCAGCTCTGCGCTCCAGACTGAGTATAGAATCAAATCTGGAGGCCAAGAAATCCCGCCACTAAACGACACCGGTTTGTTCAGGGATTGGGCTGACGAACAAGCTTATTTTATTAAAGAAAATCCAAAGAATAATGATCTACCAGCTGACATCGATGGGAAGATGAGCATAACCGTGAATCCCGATTACGTGGCACCCAAGGAACTGTTCAGAACAGCGCGTAGCCAGGGCACAAACTCTACTCTGAACAAAATCAGCAACCTCACTTGGGTGTTCCCTGTTGATTGTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCTCATATCAAGGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCCAGTTGGCTGAAGATCGTGCAGATGTAATGAAATGGAGTGCGAAACAAAAGGGTCTAGCTGTGCACAGAAACTACGCCGTTATGATTCCCAAGAATGGTAATCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTTACCAAAGCAGTGTGGATACGGATTACAGCGACGCCTTCCTGAACGGTCTCGAGATCTTCAAAATCAGCGAAGTCAGCTCAAACAACCTAGCCGGACCCAACCCGGACCCGGTTCAGACTCCACAGAACAACAATCCCGACCAAAACGGAAAGTCGAGCAGCAGAAGTGCAACGACGATAATTGGCGTCGTAGCAGGGCTGGTGTCCGGCGTCGTTTTGATCTCGCTGATCGTTTTCCTTGTCGTGTTTTTCCGACGCAAGAGAACCACAAAGCCAAAAGATTACAAAAATTCAAAGTCTTCCGGGACTTCCAAGTGGGGTCCACTCTCCTTCGCAACGACCAAGTCAACCACCACAAACTCCTCTCTACCGTCGGATCTCTGCCGCCACTTCTCCCTCGCGGAGATCAAAGCTGCCACCAACAACTTCGACGACGTCTTCATTGTCGGAGTCGGGGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCGGTGGCCATCAAGCGCCTGAAACCGGGTTCCCAGCAGGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTGATCGGATACTGCAACGAGATGAACGAGATGATCCTGGTGTACGACTTCATGGAGCGTGGCACCCTACGAGACCATCTCTACAACACGGACAACCCCGCTATCACGTGGAAGCAGCGGTTGCAGATCTGCATCGGCGCCGCGCGGGGGCTGCACTATCTCCACTCTGGCGCGAAGCACACGATCATCCACCGCGACGTGAAGAGCACGAACATCTTGTTGGATGATAAGTGGGTTGCAAAGGTTTCGGACTTTGGGCTTTCAAGATTTGGGCCCACAGGCATGGACAAGTCCCACGTGAGTACCCATGTGAAAGGAAGCTTCGGCTATATCGATCCTGAGTATTACAAACGTTATCGTGTGACAGAAAAGTCTGATGTGTACTCCTTCGGTGTTGTGCTGTTTGAGATACTGTGTGGTCGTCCACCTTTGGTTCACACTGCGGAGACGCAACAGGTGTCGCTTTCTAATTGGGTGAGACAGTGTGACCGAAAGGGGACCATCGCAGACATTGTGGAGCCCACATTGAAGAAGAAGATTGCACCAGAGTGCCTGAAGAAGTTTTGTGAGATTGGTATGAGCTGTTTGTTGGAAGATGGGGCGAAGAGACCGAGCATGAAGGATGTGGTTGGGATGCTGGAGTTTACCCTGCAGCTACAAGAAAGTGCAGAGCAACGCGCAATGGAAAAAGGAGAGGAAATTAGTGAATATAGCTTTAGTACTACTGATTTGAGTGTGACTTCGACGACTTCGAGTAGTGAAGACACTAGCTATAGTAATAATACGGTCTTGTCTTGCACTCCTTTCTCAGAGATTATGGATCCAAAGCCGCGTTGA 2589 0.5017 MTIFTFTLFFLLLYFCVHLQAYTPEEIFTISCGTTGNSSDGQRRWTGDEDTKYLSFQDATASEKASTQSPSTNQIPYSSARLSRSQFNYSFPVSPGPKFLRLFFYPSDYPSFPRNQASFTLQSNQFTLLNAFNASLNADAQATQTIFREYVVNVNDGERLILTFTPSHPNSYAFINGIEVLSMPTDLYYTPLDDIGFTLVGHGTLLSVGTSSALQTEYRIKSGGQEIPPLNDTGLFRDWADEQAYFIKENPKNNDLPADIDGKMSITVNPDYVAPKELFRTARSQGTNSTLNKISNLTWVFPVDCGFTYVLRLHFCELDPHIKDIGDRQFFIYINSQLAEDRADVMKWSAKQKGLAVHRNYAVMIPKNGNQKKFNLSLQMHPYQSSVDTDYSDAFLNGLEIFKISEVSSNNLAGPNPDPVQTPQNNNPDQNGKSSSRSATTIIGVVAGLVSGVVLISLIVFLVVFFRRKRTTKPKDYKNSKSSGTSKWGPLSFATTKSTTTNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMERGTLRDHLYNTDNPAITWKQRLQICIGAARGLHYLHSGAKHTIIHRDVKSTNILLDDKWVAKVSDFGLSRFGPTGMDKSHVSTHVKGSFGYIDPEYYKRYRVTEKSDVYSFGVVLFEILCGRPPLVHTAETQQVSLSNWVRQCDRKGTIADIVEPTLKKKIAPECLKKFCEIGMSCLLEDGAKRPSMKDVVGMLEFTLQLQESAEQRAMEKGEEISEYSFSTTDLSVTSTTSSSEDTSYSNNTVLSCTPFSEIMDPKPR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco126g00001 862 Pfam Protein tyrosine and serine/threonine kinase 531 796 IPR001245 GO:0004672|GO:0006468
Phco126g00001 862 Gene3D - 24 184 - -
Phco126g00001 862 Gene3D - 213 405 - -
Phco126g00001 862 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Phco126g00001 862 MobiDBLite consensus disorder prediction 412 436 - -
Phco126g00001 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Phco126g00001 862 ProSiteProfiles Protein kinase domain profile. 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco126g00001 862 FunFam FERONIA receptor-like kinase 27 184 - -
Phco126g00001 862 CDD STKc_IRAK 531 798 - -
Phco126g00001 862 Pfam Malectin-like domain 30 404 IPR024788 -
Phco126g00001 862 FunFam FERONIA receptor-like kinase 212 405 - -
Phco126g00001 862 FunFam Receptor-like protein kinase FERONIA 602 819 - -
Phco126g00001 862 Gene3D Transferase(Phosphotransferase) domain 1 602 825 - -
Phco126g00001 862 PANTHER OS03G0124300 PROTEIN-RELATED 4 478 IPR046957 GO:0004672
Phco126g00001 862 Gene3D Phosphorylase Kinase; domain 1 490 601 - -
Phco126g00001 862 MobiDBLite consensus disorder prediction 819 843 - -
Phco126g00001 862 MobiDBLite consensus disorder prediction 808 843 - -
Phco126g00001 862 SMART serkin_6 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco126g00001 862 SUPERFAMILY Protein kinase-like (PK-like) 500 800 IPR011009 -
Phco126g00001 862 FunFam Receptor-like protein kinase FERONIA 497 601 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco126g00001 Malectin_like 1.8e-35 CL0202