Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02445 ATGGAGAAGGAGAAGGAGGAGCTGGTGCCTGCTACCGTCACCGCCGACGAAGTTAACCATGAGGACTTCATTCTCAGCCAGGATCTCTTTTGCACACCAGATTACTTAACTCCGGAAAACCAGTTTCCTTTGAAAGGCTTCCATTCTAGCATCGACATGGAGGAGGAAGATGGCCCTTGCCCCAAGTCACCAGAGAAGCCCAGTACTTCAAAAACCAAGAGACGTCGAATGGATGATGGTATCTCAGGAGATACTCTCAGTTCTACGTCTTCTGGTGATGATCAGGCAGTTGTGGAACTTGGGAAGGACTTTGTTGGAGACGAAGTCGAATATAAGCCGAGGGCTCGAAGTTATGTGTCACGTTCTGCATTTGCATTGCGTTGCAGGGTTATGCCTCCTGCTTGCATTGGAAACTCCTTTAGGAGAAGCATTTCGGAAGAGGAACTGAGCCTTTTTAGACGCCAAAATTCTAAATGTGCTGACCTCTTCCCTTCATTTACTCATGGTAATGGTCTATCACGCTACCACTCCGACTTTCATGAGTTTGAGAGAATTGGTACAGGAAACTTTAGCAATGTTTATAAGGTATTGAAGCGACTAGATGGCTGCTTGTATGCTGTGAAACGTACCATCAAGAAGTTGGGCAGGGAAAGAGAAAGGATGAGAGCTTATACGGAAGTTCAAGCTATGGCTGCCATAGGTTTCCATGAGAACATTGTGGGATATTATTCTTCGTGGTCTGATAATGGACAACTGTATATTCAGTTGGAGCTATGTGATCACAGCTTATCCACTAAAAATTGCCCAGCATTGCTAACTGAACGACATGAAATAGAAGCTTTATATCAGGTTGCTTGTGCATTGCAATTTATACATGAGAAGGGAATCGCTCATCTTGATGTTAAGCCGGAAAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAATAGCATCCTTATTGAAGAGGGTGATGCGCGTTACATGCCTCAAGAAATTTTCAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCCTAGGAGTTTCTATGTTTGAGTTAATTCGTAGGTCACGCTTGCCAGAATCAGAAACTCAGTTCTCTAATCTTAAAGCGGGAAATATACCACACTTGCCAGGAGTTACTATGCAATTTCAAAACTTGCTTAAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCTGCTACAGAGATATTGGGAAATTCAATATTTAGAGGGCTTCAAAGGGAGTTTCCCTTGTCTGCACCTCCGTCGACTACACCTTCCACTCCATCAACTGCCTGGACCTTGAGCATCTGCTCTTGCACAACTTATGCATATGACAATAACCGGTGTTCTATTTGGGTTGGCAACCTTTTGAATGTGCAACAATTGTCTTCAGATGATAGTAGTGGAGAAACTTTGTATCTCAAACTTGCAGCTTCTAAGATTCATGCTGATAAAAGCAGTAAGGGGACGATTATTGGTGTGGTTGTGGGAGTGGTTGTTGGCGGTGGGGTTCTCTTGGCCATTCTTTGGTCAAGGAAGAGAATGTTGGTTTCAAGAAAGGTTGCGGATGGTTCGTTGGTGACATATGGGTACAGAGATTTGCAAGATGCAACAAGGAATTGGGAGGACGAGGGTTTGGTTTTGTTTTCAAAGGAACGTTGGATGATTCCAGTGTGA 1722 0.4332 MEKEKEELVPATVTADEVNHEDFILSQDLFCTPDYLTPENQFPLKGFHSSIDMEEEDGPCPKSPEKPSTSKTKRRRMDDGISGDTLSSTSSGDDQAVVELGKDFVGDEVEYKPRARSYVSRSAFALRCRVMPPACIGNSFRRSISEEELSLFRRQNSKCADLFPSFTHGNGLSRYHSDFHEFERIGTGNFSNVYKVLKRLDGCLYAVKRTIKKLGRERERMRAYTEVQAMAAIGFHENIVGYYSSWSDNGQLYIQLELCDHSLSTKNCPALLTERHEIEALYQVACALQFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSILIEEGDARYMPQEIFNENYDHLDKVDIFSLGVSMFELIRRSRLPESETQFSNLKAGNIPHLPGVTMQFQNLLKVMMDPDPLKRPSATEILGNSIFRGLQREFPLSAPPSTTPSTPSTAWTLSICSCTTYAYDNNRCSIWVGNLLNVQQLSSDDSSGETLYLKLAASKIHADKSSKGTIIGVVVGVVVGGGVLLAILWSRKRMLVSRKVADGSLVTYGYRDLQDATRNWEDEGLVLFSKERWMIPV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02445 573 ProSitePatterns Protein kinases ATP-binding region signature. 185 213 IPR017441 GO:0005524
Phco11g02445 573 MobiDBLite consensus disorder prediction 51 81 - -
Phco11g02445 573 Gene3D Transferase(Phosphotransferase) domain 1 257 425 - -
Phco11g02445 573 CDD PAN_AP_plant 449 492 - -
Phco11g02445 573 ProSiteProfiles Protein kinase domain profile. 179 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02445 573 Gene3D Phosphorylase Kinase; domain 1 147 256 - -
Phco11g02445 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Phco11g02445 573 FunFam Wee1-like protein kinase 258 427 - -
Phco11g02445 573 SUPERFAMILY Protein kinase-like (PK-like) 169 440 IPR011009 -
Phco11g02445 573 MobiDBLite consensus disorder prediction 51 93 - -
Phco11g02445 573 Pfam Protein kinase domain 179 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02445 573 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 93 464 - -
Phco11g02445 573 SMART serkin_6 179 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02445 Phco-Chr11 31876790 31882770 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Phco11g02445 Pkinase 6e-47 CL0016