Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02442 ATGGATGGTGGATTGGGGTGTGTTCTGCTTCCCCTTCTGCTGTTCTGTGTTGTGTTGACAGCAGAATCGGCGTGCAAGAAGGGTTGCTCTCTGGCACTGGGGTCCTACTACATGTGGCAGAACTCAAACCTAACATACATCTCCCAGATCATGGCCTCGTCCCTTCTCACCACTGCCGATGACATAGTCCTCTACAACAAGGAGACCATACCCAACAAGGATTTTGTCGAGGCCTTCATAAGGGTCAACGTCCCCTTCCCTTGCGACTGCATCGACGGCCAGTTTCTCGCACACACCTTCAAGTACGATGTTCAGTCGCAGGATTCTTATGAGTATGTTGCCAAGACCGTGTACTCCAACCTCACCGATGTTGCCTGGCTGAGGAGGTTCAACAGCTACGAACCCGATAACATTCCCGACACGGCCACGCTCAACGTTACGGTGAATTGCTCATGTGGGAACAGTGATGTTGCAGATTATGGGTTGTTCATCACGTACCCTCTTAGAACCGGGGAGACTCTCGGCTCGGTGGCTAATGCTGTGAGCCTTGACTCGGGGTTGCTGCAGAGGTACAATCCTGGCGTCAATTTCAACCAGGGGAGTGGACTCGTTTATATTCCCGGAAAAGGTCTTGCTGTTGGGGCTATTGCTGGAATAGTTGTTGGAGTTGTGGCAGTTCTTCTGCTATTAGGAGTTTTTATATATTTTAGAAGATTCCGAAAGAAGATACAGAAGGATGAACTTCCACGAGATTCTAGTGCACTCTTTGCTCAACATGGGAAGGATGAAACTTCTCGTAGTAGTGTGAATGAAACTTTTGGTCCTGGTGGTCCTGCCGCCATCACAGGCATAAAAGTGGACAAATCGGTGGAATTCACATATGAGGAACTGGCAACTGCCACAGATAACTTTAGTTTGGCTAATAAAATTGGTCAAGGAGGTTTTGGGTCAGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCCGAATTGAAAGTCTTGACACGTGTTCATCATTTAAACCTGGTGCGGTTGATTGGGTTTAGCATCGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAAAATGGAAACCTAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCACTGCCATGGGCTACTCGTGTACAGATTGCTTTGGATTCTGCAAGAGGTCTTGAGTATATTCACGAGCATACAGTGCCTTTATATATTCATCGTGACATAAAGTCAGCAAATATATTAGTAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGATTAACCAAACTTACAGAAGTTGGAAGTTCATCACTTCCCACGGGTCGCCTAGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGGGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGACAAACGATTCTGCTGTCGACTCAAAGGGCCTAGTAGCTCTGTTTGATGGAGTTTTAGGTCAGCCGGATCCCACTGAAGATCTCTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGATTCTGTCCGCAAGATGGCACAACTAGCCAAAGCATGCACACAAGACAATCCCCAACTCCGTCCAAGTATGAGATCTATTGTGGTAGCGTTGATGACACTTTCTTCAACTACAGACGAGTGGGATGTTGGTTCTTTCTATGAAAATCAAAATCTTGTGAATCTAATGTCAGGAAGATAG 1815 0.4579 MDGGLGCVLLPLLLFCVVLTAESACKKGCSLALGSYYMWQNSNLTYISQIMASSLLTTADDIVLYNKETIPNKDFVEAFIRVNVPFPCDCIDGQFLAHTFKYDVQSQDSYEYVAKTVYSNLTDVAWLRRFNSYEPDNIPDTATLNVTVNCSCGNSDVADYGLFITYPLRTGETLGSVANAVSLDSGLLQRYNPGVNFNQGSGLVYIPGKGLAVGAIAGIVVGVVAVLLLLGVFIYFRRFRKKIQKDELPRDSSALFAQHGKDETSRSSVNETFGPGGPAAITGIKVDKSVEFTYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGFSIEGSLFLVYEYIENGNLSQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPLYIHRDIKSANILVDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSAVDSKGLVALFDGVLGQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDEWDVGSFYENQNLVNLMSGR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02442 604 FunFam PTI1-like tyrosine-protein kinase 3 375 590 - -
Phco11g02442 604 FunFam LysM receptor kinase 2 283 374 - -
Phco11g02442 604 CDD STKc_IRAK 310 573 - -
Phco11g02442 604 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02442 604 Pfam Protein tyrosine and serine/threonine kinase 306 575 IPR001245 GO:0004672|GO:0006468
Phco11g02442 604 Gene3D Transferase(Phosphotransferase) domain 1 375 596 - -
Phco11g02442 604 ProSiteProfiles Protein kinase domain profile. 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02442 604 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 590 IPR044812 GO:0019199|GO:0045087
Phco11g02442 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Phco11g02442 604 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Phco11g02442 604 SUPERFAMILY Protein kinase-like (PK-like) 287 576 IPR011009 -
Phco11g02442 604 Gene3D Phosphorylase Kinase; domain 1 280 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02442 Phco-Chr11 31798813 31807419 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco11g02442 PK_Tyr_Ser-Thr 1.5e-44 CL0016