Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02360 ATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATCCTGTACCTGGTAGCCTTGGAGAAGATAATATTACCACTGGGCAGACTGATCCAGAGACGATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTAGATGAACTTGAGCACAGGATGTGGAAGGACAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCTAAAGAAGGAATTGATGCTGTGAAACAGAGGCAGTCGCAAGAACAAGCAAGGAGGAAGAAGATGTCGAGGGCTCAGGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGGAAACCAGTGACTGGAGCATCTGATAACCTTCGTGAATGGTGGAAGGATAAAGTCAGGTTTGATCGTAATGGACCTGCAGCTATAACAAAGTACCAAGCTGATAATGCAATTCCTGGAAGGAATGATGGATGCAATTCAATTGGTCCAACTCCACACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTAATGCAACACTGTGATCCTCCTCAGAGGCGGTTTCCATTGGAGAAGGGTATTCCTCCTCCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTGCCTAAAGATCAAAGTCCTCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTCGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCTGATATTGACAAAATTCGCAAGCTTGTGAGGCAGTCCAAGTGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGGGAGCTTTACCCTGATTATATCCCTCCATTAGCCTCAGCTGGAGGTAGTGGATCTTTGGTGGTGAATGATAGCAATGAGTATGATGTTGAAGGGGGTGAGGATGAGGCTAACTTTGATGTGGAAGACAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTGTGGTGGTTCAGCAGCCCTCTTTTTCAATCAAGGGAGAGGTAGTTACAAATATGGATCTTCTTAGGAAGAGGAAGGTCTCTTCTAATGACTTTAACATGATGGATTTGAAAATTTACACATGTGAACAGCCTCAGTGTCCTTACAGTCAAGTCCAGTTTGGTTTCCCTGACAGAATCTCTAGGGACAATCATAGGTTAATTTGTGCATTTAGAGGTCCTTCAGATTTTGGGGGTCCAAATTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCACTCATTTGTTCAACCCAAGCCTACTACTGCTCAATCTGCTAACATGGTTCCGCCTGTAATTGATCTTACTGGACTTGAAGTTTCAGAAGATGGCAAGAAAAGGATAAGCGACCTTATGACTAACTATGATACAAATGTTCAAGGCAACAGCAAGAACATGAGTTCCTCCTGTAATCGTGTAGCTGCCGAAGTTTTGAACCTTACTCAGCATGGCATGCAGCCGCAACATGACAACTTCATTCGCAGTCGAGGAAACACTATGGAAGGAAATGTCTTTGACGAAGCTACCATGTCAAATAATCATCATACTTTTGCAAGAGATGAATGCCAATTTGACAGGTTCAAAGCTTTGAATACCCCCTTTGAGACCAATCACAACAACAGTAACTTTCACTCCATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTTGTAGGCATGGATGTTGTTCAGAAACAGCCAGATTTTTCTGTATGGTACCAGTGA 1875 0.4352 MMMMMFDEMGFCNDLDPVPGSLGEDNITTGQTDPETIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIDKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASAGGSGSLVVNDSNEYDVEGGEDEANFDVEDRKHENIHMSNLGMERMRGTVVVQQPSFSIKGEVVTNMDLLRKRKVSSNDFNMMDLKIYTCEQPQCPYSQVQFGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYPHSFVQPKPTTAQSANMVPPVIDLTGLEVSEDGKKRISDLMTNYDTNVQGNSKNMSSSCNRVAAEVLNLTQHGMQPQHDNFIRSRGNTMEGNVFDEATMSNNHHTFARDECQFDRFKALNTPFETNHNNSNFHSMFGSFCDLASFDFKEDMQGVVGMDVVQKQPDFSVWYQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02360 624 Pfam Ethylene insensitive 3 50 297 IPR047091 GO:0003700
Phco11g02360 624 FunFam Ethylene insensitive 3-like 1 82 160 - -
Phco11g02360 624 Coils Coil 49 69 - -
Phco11g02360 624 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Phco11g02360 624 MobiDBLite consensus disorder prediction 72 93 - -
Phco11g02360 624 FunFam Ethylene insensitive 3-like 1 170 307 - -
Phco11g02360 624 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Phco11g02360 624 Gene3D - 82 159 IPR023278 GO:0003700|GO:0005634
Phco11g02360 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 5 583 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02360 Phco-Chr11 26453396 26455270 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Phco11g02360 EIN3 7e-130 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02360 11 26453396 26455270 Phco3g00926 3 7749650 7751497 PCT