Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02282 ATGGTGACCGTAGTTGCAATCCTGCATGAGGTTTATACTCCTATGGGATACAAAATCGCGGTGGATAACCAGTTGCGCGGGGTAAACCAGAGAATAATCGACAAAGAACTTGCAAAGAAGAAAGAAGAGTACCTGAACAACGAGGAACTGGCTCAGATTGCCAAACAATATGAATCAAATAAGGTTGGATTGAAGATAAAGCTGTTTACAGGATCTCCACTAAAAGAAGTGGCTTTAGGAGTAGCCATAGACCTACAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGAGGAGTTTTTCCTGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAAGGATCGGATTCTTCGACTAAGAGGGCCTTCAAATCTTCCAGATGAAATACCATGTAACAGCCATGAGGCATATGATGAAAGTGTACCAAGTGTTCCATATCAACATCTTTTCGACATTGATGCTTTCCCCAAGAGAAAACTTGAAGATGGTGAACAGAACCAGATGCAAATTAGGCCCTATGAGGCAGAGGGTTGCTCGAATGACAACACCAATATTAATGAAAAAATAGATCCGACAAGTCCTAATCACCTGAGAATGGATGGAACAGAAATAAATAGCATGCAAATGACTGATAAAATAGAAAGAGCTGAGCAAGGCCACGATCAAAAACAGATCCTAAGCATGCCCCTTGAGATTGAGGGGGACACAACAATTAAGATCAAAACTGATCAAGCAACTGCTCTGGAAATAGCTGATCAACTAAGAAAACATGAAGAAAAGACAAACAACTTCTTCCCTGGTGAGAATTGGGACTTGAGCAATCCAACAAAGAGTGAAGAAATGATTGATCAACCAAAAGATGATCCGCTGAGTCAGAATCAAGCACAGACACTGAGCATTTTCAGTGGTGCTATATTGGATGATGGAGAGCAAGAGAAAAGTATTTTGGAAAATTCAATGTACATTTTCTGCTCTGTCTGCAAAACTAGACGACCTAATATTGGGTTCCAAAAAGAATTTACTTATGAAGAACTCCTAGAAGCCACAGATGCATTTTCATTGAAGAACTGTCTCTCCCAAAGCGGATCTCTATTCACTTTCAAAGGTCAGGTGGAGGGAGGGATGACAGTAGTGGTTAAGCAGCATGAAGTAACCAACACTCAAGTAAGGGAGAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTACACATAAGAATGTGATTACTCTATTGGGCTCATCTACAACAGAATCTTTCCTGTTTACTGTATATGAGTATGCTTGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAAGCTCCAGATCCTTGACCTGGAAAGAAAGGGAAAAAGTGGTAATAGGCCTTGCCAGAGGCCTTAAGTACCTACATGACAATAACATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACCCATGACTTCAATTCACTGATTGGAGATTTCAACTTTGGGAAAGAACACCGATTGAAGTCCTACAAAACTAAAAACAAAGAGAATTATGAATACCTAGCACCAGAATACCGGGAGAAAGGGAAATCATCATCAAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCTCTGGGCGAAGGACTACGGATTTCACGTCAGAAGATAAAAGCCTTGTTGAATGGGCAAAGCCTTTACTTAAAAAGAAGAATTACTCAGAACTGGTGGATCCCATAATCAGAAACTCCTACGAAGAGGATCACCTTCGTTGGATGGTCAAAGTAATAACAGAATGTTTGGAAAAGAATCCTAAGAAAAGGTTATCAATGAATGTGGTTGTTTCTGAACTACAAGGCATAGCAGACAGTGAACTCTACCACATGACAGAAGATATTACTTCAGCTATATCAGATTCGAGAAGTGTGTCAGAAATAAATGGTTCTCAAGGTCCAATAATAAATAAAGCTGATCAACCAAACCAGGAAGTCGAGCAAAGTGAGAGCATACTCTCTGGGGAGAAAAACAAGTTAAGACTAACAGTTGAGAATAATCTCTTTTACATAGCAAACCAGGGAAACTCTGATAAACTGAGACAGAATGAAGAACAGAAGCAAAGCAGGTCCCGAGGGGAGGAGTGGAGCTCAGGAAAGATGATAACAAATGACCATAGAATGGACGAGACAGAGGTTGATCAGCTGAATGAGTTTGAAGAACCGATTCTAAGCCCACCCCATATGGAGGGCATCACAACACAAAAAATTAGTGTTGAGAACTTGCAGGATGGATGTCAAGGTGAAATAATTTTGGAGAATTCGAAGTCCTCTGCATGCTCTATTTGCAGAAGTAGAAGACCAAACAATACATGGTCAAAAGACTTTACTTATGATGAACTTCTAGAAGCCACAGAAGGATTTTCCACTCAGAACTCTCTATCTGAAAATGAAGATGGACCTACTTTCCAAGGCCTGCTACTAGAGACACGGGTAAAAGTAGTTGTTAAGAAATATCAAGTTAATACCTCCCAAGAACAGAAGATAATAAAATCAGAAGCGCAGCTTCTCATCAGTTCTAGTCATAAAAATGTGGTCATGCTGTTGGGTTTATGTACAAATAAAAGCCAACTCATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACCAGTACCTAACAAGGGGAAGTTTCCAGTTATTGACTTGGAAGCAAAGGCTGAAAGTAATAATGGGTACCGCCAGAGGTTTAAAGTACCTACATGGGAAAGACATAATCCATGGAAATATAAAACCAAGTAATATTCTTCTAACACACGAGTTTGAACCACTGATTGGAGATTTCCACTTCGGACAAGAGAAAGTTGGACCAAAGAAATCCAGCAAAGATAAAAGTGTAAGAAATTCTGGATATGCAGCACCTGAGTATCTGGAGAATGGAAAACTATCAAATAAGACAGATGTCTACTCCTTTGGAGTGGTTCTTTTGGAGCTGATCAGTGGCCGGAGGGCTGCGGACAAATTACCAGATGGAAAAAGCCTTGTTAACTGGGCCAGGCCCCTACTGACAGGAAAGAAGTACCCACAGTTGTTGGATGCGAAAATGAGTGACTCCTATGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTTACAGAACAGTGTCTCAGAAAGAATCCTAAGGATAGATTTTCGATGAATGTGGTTCTATCTACCTTGCAAGGCATAGGAGAATCAGAAGAGTGTTGTGTAATTGAAGATTCTTCTCTAGAAAAGTCATATCTAAATGGTCTTGCCATGAGTAGTACACAAGGTCTAATGAAGGCTGATCAAGTGAAGAAACAGGAACAAGAATTGATTGACAGAAACCTATACAAGCAGGAGAGTTGTCCAATATTGACAGTCAAAAGCAATCACATGGAAGGTCATAGAAATGAAGATCAGATGATACAGGGTGGAAAAGATGTGCAGACGAGTCCCTATGAGGAGATGTTCGGGGTAAGTGCTATCAGCAATGACATGATTGATCAGTTAAACCCTGACCAACAATTCCAGGAAAAACTGCAAATTAAGGGAAGCTTTGACATGGAAGAAATTAATAAAAAAGTAGAAAAGCAACAAGAGGTGAGCAAGGATAAAAAACAAATACAGGGAAGCTGTGATGATAGCTTATTGAATGGGAATGAAGGCAAAATCTTTTCGGAAAGTTCAAATTCTTCTGCTTGCTCAATCTGCAAAAGTAGGCGACCAAACAGTGAATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTCTACAGAAGGATTTTCAGTTAAGTACTCTCTACGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTTATTAAGCAACATGCATTCTCAAGCTTACAGGAGCAGAAGGTGTTCATGTCAGAATTCGAATTGCTTATAAATGTCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGTATACGATTAAGTCAACTGCTAATTGTATATGAGAAGGCATGCAACGGTTCACTTGACCGGTACTTATCAAGAGAATATGGAAGAACACTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTCTTGCTAGTGGTCTAAACTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTGAAACCACTGGTAGGAGACTTTGTGTTTGGAAAAGAAAGAAGTGAATTGAAAAATCTCAGCAGACTTAAAAGTATGAGGAATTGTGGACGCACTGCACCAGAGTGTCAGGAGAGTGGAAAACTATCGACTAAGGCAGATGTATACTCTTTTGGTATAGTTCTTGTGGAGTTGATCACTGGCCGTATGCTTACAGAAAAAATATCAGGAGAGAGATGCCCTACCGAATGTATAAGGTCACTTCTTGAAGAACGAAAGTTTCTACAGTTGGTAGATCCCAAAGTCAGCAGCTCCTATGATGAACAAGAACTAGTTTCATTGGTCCACGTAATAGAAAATTGTCTGAGGAAGAATCCAAAAGAAAGATTCAAAATGAATATGGTTGTCTCTGCATTGCAATCTATGGTAGATTGCAGTGACATATATGTAAAGCAGGACTTTTCATCAGAAAACTTGAATGTTTCAGAAGTAACACAGACAAAAGTGGAGGAGGAACCACCAAATGAAGAAGGTTTAGACATGGAGATTAGTGAAGAAAGAGAGCACAACATAAGTTGTAGTGGAGGCAATGGAACAGAAATATGTCAAGAGTGTGACAGCAACCCAACTTCTTGTGAAAATAGAAAGGAAACAGAAGAAAAAGAAAGCTTAAGCACCAAGGTATATTGGGAAGGGTGCTTATCTTATGGTGGAGCTAAAGAATTTTATCTCGAAGGGATCAAAGAGTACACAGCATGTGAAGAATTTTTCGGCTTTTGTGATTTAATTTGA 4971 0.3937 MVTVVAILHEVYTPMGYKIAVDNQLRGVNQRIIDKELAKKKEEYLNNEELAQIAKQYESNKVGLKIKLFTGSPLKEVALGVAIDLQATWVILDRKMKKDEEFFLQRLSCGISILKSKDRILRLRGPSNLPDEIPCNSHEAYDESVPSVPYQHLFDIDAFPKRKLEDGEQNQMQIRPYEAEGCSNDNTNINEKIDPTSPNHLRMDGTEINSMQMTDKIERAEQGHDQKQILSMPLEIEGDTTIKIKTDQATALEIADQLRKHEEKTNNFFPGENWDLSNPTKSEEMIDQPKDDPLSQNQAQTLSIFSGAILDDGEQEKSILENSMYIFCSVCKTRRPNIGFQKEFTYEELLEATDAFSLKNCLSQSGSLFTFKGQVEGGMTVVVKQHEVTNTQVREKVKSEIQTILKATHKNVITLLGSSTTESFLFTVYEYACNGSLDKYLSKESSRSLTWKEREKVVIGLARGLKYLHDNNIVHCNIKPSNILLTHDFNSLIGDFNFGKEHRLKSYKTKNKENYEYLAPEYREKGKSSSKTDVYSFGVVILELISGRRTTDFTSEDKSLVEWAKPLLKKKNYSELVDPIIRNSYEEDHLRWMVKVITECLEKNPKKRLSMNVVVSELQGIADSELYHMTEDITSAISDSRSVSEINGSQGPIINKADQPNQEVEQSESILSGEKNKLRLTVENNLFYIANQGNSDKLRQNEEQKQSRSRGEEWSSGKMITNDHRMDETEVDQLNEFEEPILSPPHMEGITTQKISVENLQDGCQGEIILENSKSSACSICRSRRPNNTWSKDFTYDELLEATEGFSTQNSLSENEDGPTFQGLLLETRVKVVVKKYQVNTSQEQKIIKSEAQLLISSSHKNVVMLLGLCTNKSQLMVVFEKVCNGSLDQYLTRGSFQLLTWKQRLKVIMGTARGLKYLHGKDIIHGNIKPSNILLTHEFEPLIGDFHFGQEKVGPKKSSKDKSVRNSGYAAPEYLENGKLSNKTDVYSFGVVLLELISGRRAADKLPDGKSLVNWARPLLTGKKYPQLLDAKMSDSYEEEKLVWLVQVTEQCLRKNPKDRFSMNVVLSTLQGIGESEECCVIEDSSLEKSYLNGLAMSSTQGLMKADQVKKQEQELIDRNLYKQESCPILTVKSNHMEGHRNEDQMIQGGKDVQTSPYEEMFGVSAISNDMIDQLNPDQQFQEKLQIKGSFDMEEINKKVEKQQEVSKDKKQIQGSCDDSLLNGNEGKIFSESSNSSACSICKSRRPNSELQRKYTYEELQASTEGFSVKYSLREGEYGPAFRGQLENNQEIVIKQHAFSSLQEQKVFMSEFELLINVRHENVIMLLGSCIRLSQLLIVYEKACNGSLDRYLSREYGRTLTWGERVKVAIGLASGLNYLHENNIAHGGIKPSNILLNHELKPLVGDFVFGKERSELKNLSRLKSMRNCGRTAPECQESGKLSTKADVYSFGIVLVELITGRMLTEKISGERCPTECIRSLLEERKFLQLVDPKVSSSYDEQELVSLVHVIENCLRKNPKERFKMNMVVSALQSMVDCSDIYVKQDFSSENLNVSEVTQTKVEEEPPNEEGLDMEISEEREHNISCSGGNGTEICQECDSNPTSCENRKETEEKESLSTKVYWEGCLSYGGAKEFYLEGIKEYTACEEFFGFCDLI 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02282 1656 ProSiteProfiles Protein kinase domain profile. 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02282 1656 Gene3D Phosphorylase Kinase; domain 1 329 431 - -
Phco11g02282 1656 SUPERFAMILY Protein kinase-like (PK-like) 789 1075 IPR011009 -
Phco11g02282 1656 FunFam Proline-rich receptor-like protein kinase PERK8 1230 1343 - -
Phco11g02282 1656 Gene3D Transferase(Phosphotransferase) domain 1 883 1091 - -
Phco11g02282 1656 Gene3D Transferase(Phosphotransferase) domain 1 433 642 - -
Phco11g02282 1656 Gene3D Transferase(Phosphotransferase) domain 1 1345 1557 - -
Phco11g02282 1656 MobiDBLite consensus disorder prediction 693 715 - -
Phco11g02282 1656 PANTHER OS01G0253100 PROTEIN 730 1076 - -
Phco11g02282 1656 MobiDBLite consensus disorder prediction 180 202 - -
Phco11g02282 1656 Gene3D Phosphorylase Kinase; domain 1 791 881 - -
Phco11g02282 1656 SUPERFAMILY Protein kinase-like (PK-like) 341 637 IPR011009 -
Phco11g02282 1656 MobiDBLite consensus disorder prediction 698 715 - -
Phco11g02282 1656 MobiDBLite consensus disorder prediction 180 195 - -
Phco11g02282 1656 MobiDBLite consensus disorder prediction 266 295 - -
Phco11g02282 1656 Pfam Protein tyrosine and serine/threonine kinase 1271 1532 IPR001245 GO:0004672|GO:0006468
Phco11g02282 1656 Pfam Protein tyrosine and serine/threonine kinase 376 618 IPR001245 GO:0004672|GO:0006468
Phco11g02282 1656 Pfam Protein tyrosine and serine/threonine kinase 818 1070 IPR001245 GO:0004672|GO:0006468
Phco11g02282 1656 ProSiteProfiles Protein kinase domain profile. 1268 1536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02282 1656 SUPERFAMILY Protein kinase-like (PK-like) 1251 1532 IPR011009 -
Phco11g02282 1656 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 883 1082 - -
Phco11g02282 1656 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 432 631 - -
Phco11g02282 1656 ProSiteProfiles Protein kinase domain profile. 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02282 1656 Gene3D Phosphorylase Kinase; domain 1 1230 1342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02282 Phco-Chr11 21533625 21547318 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco11g02282 PK_Tyr_Ser-Thr 8e-38 CL0016