Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02269 ATGGCTATGGCAGCTCCAGGGCAACTCAACGTGAACGAGTCACCGTCGTGGGGGTCCAGAAGCGTCGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTATATGGCTAGAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAAAAGATACGAATGGACAATGAGAGAGAAGGGTTTCCTATAACAGCTATTCGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTAATCAAGTTGAAAGAAATTGTGACTTCCCCAGGTCCGGAGAAAGATGAACAAGGGAGGCCAGACGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACTGGTCTTGCTGACCGACCAGGGATGAGATTCACAGTTCCCCAAATTAAGTGCTACATGCGGCAGCTTCTGACTGGGCTGCATTACTGTCACGTAAATCAAGTACTTCACCGTGATATCAAAGGTTCAAATCTTCTAATAGATAATGAAGGTAATCTGAAACTTGCTGATTTTGGATTGGCACGATCATTTTCTAATGAGCACAATGCAAATCTTACTAATCGTGTCATTACATTATGGTACAGACCCCCTGAGCTGCTGCTTGGGACAACAAGGTATGGGCCAGCTGTAGACATGTGGTCTGTGGGGTGCATCTTCGCAGAGCTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCAGATGAAGTGAACTGGCCTGGTGTTTCTAAGACTCCTTGGTATAATCAGTTTAAACCAACACGACCAATGAAAAGACGCCTCCGGGAAGTTTTCAGACATTTTGATCGTCATGCTCTGGAATTGTTGGAGAAGATGCTGACACTTGATCCTGCTCAGAGAATTACTGCCAAGGATGCGCTTGATGGTGAATATTTCTGGACTGATCCATTACCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACATGAGTTCCAGACCAAGAAAAAGCGCCAGCAGCAACGACAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCTCAACAGCATTCTCGACTGCCCCCTATTCAGCAGGCTGGTCAGCAGCACCCTCAAATGCGACAAGGTCCTAACCACCCTATTCATGGGTCTCAACCAGGAGTTGCTGCAGGGCCTAGCCATCATTATGGGAAGCCTCGAGGTCCCTCTGGTGGGCCTGGAAGATATCCTCCTGGTGGAAACCCTGGTGGGGGATACAATCACCCGAATCGTGGAGGTCAAGGAGGAGGAGGTGGCGGTTATGGCAGTGGGCCATATCCTCCCCAAGGGCGGGGTGCATCTTATGGTTCAAGTGGTATGCCTGGTGGGCCCAGTGGTGGTCCTCGTGGTGGGGGTGGTAGTGGCTATGGAGTTGGAGCTCCAAATTATCCTCCAGGTGCTCCTTATGGTGGATCAGCAGCAGGGCGTGGTTCAAACATGATGGGTGGTAACCGCAACCAACAGTATGGTTGGCAGCAGTAA 1566 0.4732 MAMAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRITAKDALDGEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHSRLPPIQQAGQQHPQMRQGPNHPIHGSQPGVAAGPSHHYGKPRGPSGGPGRYPPGGNPGGGYNHPNRGGQGGGGGGYGSGPYPPQGRGASYGSSGMPGGPSGGPRGGGGSGYGVGAPNYPPGAPYGGSAAGRGSNMMGGNRNQQYGWQQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02269 521 MobiDBLite consensus disorder prediction 372 394 - -
Phco11g02269 521 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Phco11g02269 521 MobiDBLite consensus disorder prediction 507 521 - -
Phco11g02269 521 CDD STKc_CDK9_like 25 324 - -
Phco11g02269 521 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Phco11g02269 521 FunFam Cyclin-dependent kinase C-2 12 121 - -
Phco11g02269 521 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02269 521 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02269 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Phco11g02269 521 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Phco11g02269 521 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Phco11g02269 521 FunFam Cyclin-dependent kinase C-2 122 364 - -
Phco11g02269 521 MobiDBLite consensus disorder prediction 335 521 - -
Phco11g02269 521 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Phco11g02269 521 MobiDBLite consensus disorder prediction 337 366 - -
Phco11g02269 521 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02269 Phco-Chr11 21142351 21151674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco11g02269 Pkinase 4e-74 CL0016