Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02267 ATGGGAAATACTTGTGCGAAAGGAAAACCGATTGCTCATGTATCTTCCTCCAATTTGTCTGGAAGTAAGAGGCCTGTAAGTAAGCCAAGGCAGTATTCAAATTCTTCTGTACAAAATCAAGGTCCAAAAACTTCAGAATCAAATGTTACCGCATCCATCTCTAGTAGCCTCAAGTCCTTTAGCTTGAATGATCTAAAGGAGGCCACTAAGAACTTCAGGCGAGAAAATTTAATCGGAGAGGGAGGATTTGGGCGTGTCTTCAAAGGATGGATTGATGAGAACACATATGGTCCCACAAAACCAGGCACTGGAATTGTGGTGGCCATTAAAAATCTTAAGCCAGAAAGCTTCCAAGGCCACAAGGAATGGCTAGCAGAAGTCAGTTATCTTGGGCAGCTTCAGCATGAGAATTTGGTGAAACTTATTGGTTATTGTTTGGAAGGTAAAAACAGGCTTCTGGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAGAATCATTTATTCAGAAAAGGTGTTCAACCTATGGCTTGGGTTACAAGGGTCAACATTGCAATCAGTGTTGCAAGAGGACTGACATTCTTACATTCCCTGGACCAAAATGTGATCTTTCGTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGACTTCAATGCAAAGCTTTCAGATTTTGGCTTGGCAAGGGATGGTCCAACTGGAGATAATACTCATGTTTCAACTCGAGTTATAGGAACTCAAGGTTATGCTGCACCAGAGTATGTTGCTACAGGTCACCTGACTTCAAGGAGTGATGTATATAGCTTTGGTGTAGTCTTGTTAGAGTTGCTTACCGGTAGGCGTGCAGTGGAAGATGACAGACCTGGATTTTCAGAGGAAACCTTGGTGGATTGGGCAAAGCCATTCTTGATTGACAACAGAAGAGTTTTGAGAATAATGGACACAAGGTTGGGGGGTCAATACTCTAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCACTGCAATGCCTCAACACTGACCCCAAATTTAGACCCCCTATGGTGGAAGTTCTAGCAGCATTGGAAGGGCTTAATTCCTCAAACTCATTCACAAGGACACCAGCAACACCTGAGAGCCATGCAACAAAAAATTCTGATGGCCATTCACAAAAGTAA 1152 0.4262 MGNTCAKGKPIAHVSSSNLSGSKRPVSKPRQYSNSSVQNQGPKTSESNVTASISSSLKSFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYGPTKPGTGIVVAIKNLKPESFQGHKEWLAEVSYLGQLQHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVTRVNIAISVARGLTFLHSLDQNVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLIDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLNSSNSFTRTPATPESHATKNSDGHSQK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02267 383 SUPERFAMILY Protein kinase-like (PK-like) 46 359 IPR011009 -
Phco11g02267 383 Pfam Protein tyrosine and serine/threonine kinase 75 352 IPR001245 GO:0004672|GO:0006468
Phco11g02267 383 MobiDBLite consensus disorder prediction 10 50 - -
Phco11g02267 383 FunFam Serine/threonine-protein kinase BIK1 39 157 - -
Phco11g02267 383 ProSiteProfiles Protein kinase domain profile. 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02267 383 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Phco11g02267 383 SMART serkin_6 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02267 383 Gene3D Transferase(Phosphotransferase) domain 1 158 377 - -
Phco11g02267 383 CDD STKc_IRAK 78 356 - -
Phco11g02267 383 PANTHER OS01G0588500 PROTEIN-RELATED 41 356 - -
Phco11g02267 383 MobiDBLite consensus disorder prediction 360 375 - -
Phco11g02267 383 MobiDBLite consensus disorder prediction 360 383 - -
Phco11g02267 383 MobiDBLite consensus disorder prediction 1 50 - -
Phco11g02267 383 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 158 367 - -
Phco11g02267 383 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02267 Phco-Chr11 21121237 21124325 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco11g02267 PK_Tyr_Ser-Thr 2.1e-49 CL0016