Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02242 ATGAATGCCAAGGTACAAGACTCTGATGATACCAAGAAGACTGAAGAAGTTGTGCTTCCTGGCTTCAGATTCCACCCCACAGATGAAGAACTTGTTGGGTTCTATCTGCAGAGAAAGGTGGAAAAGAAGCCTCTTAAGATTGAACTCATCAAGCAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCATTTGGGGACAAAGAATGGTATTTTTTCTGCATAAGGGGGAGGAAGTACAGGAACAGTGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAAGCCACAGGAATAGACAAGTCCATATACTGCCTGAAGGAACCTCATGAATGCATTGGCCTGAAGAAGTCATTGGTGTATTATCGTGGAAGTGCTGGCAAAGGAACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCAAATGCAAAATCTACCACCAACATTGCTAATGTTACCAATAACCTTCATGAAGCTGAGGTGTGGACACTCTGCAGGATATTCAAACGCACCCCAACGTTCAAAAAGTACACTCCAAATTTGAAGGACTCAACAGCCATCACCAAATCCAACACTGTGAATTCCAACACAAGCACCTTAGATTCTGACAACTGCAAGCCATATTTGATCTGCAGAGACCCTGAGATGATGCAACAACTAAAGCCAGTATTTGGACAGGTTGATGAAAAGAAACACTTATTTCTTGGTCAGTTTGGCCAACTACCCCATCTTCAACCCCCATCAACCCCTTATCCAAGTTTTTGGAACCAGAATGTTGAGGATTATGCATTTGCCGATGAGAATTGGGATGACCTCAGATCTGTGGTTCAGTTTGCCATTGATCCTTCCTCGGTGTTTGATTGTACAGAAGAAACACATATTCCACCCTACTTTTCTTAG 921 0.4289 MNAKVQDSDDTKKTEEVVLPGFRFHPTDEELVGFYLQRKVEKKPLKIELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCLKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSTTNIANVTNNLHEAEVWTLCRIFKRTPTFKKYTPNLKDSTAITKSNTVNSNTSTLDSDNCKPYLICRDPEMMQQLKPVFGQVDEKKHLFLGQFGQLPHLQPPSTPYPSFWNQNVEDYAFADENWDDLRSVVQFAIDPSSVFDCTEETHIPPYFS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02242 306 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Phco11g02242 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 208 - -
Phco11g02242 306 SUPERFAMILY NAC domain 16 176 IPR036093 GO:0003677|GO:0006355
Phco11g02242 306 Gene3D NAC domain 27 181 IPR036093 GO:0003677|GO:0006355
Phco11g02242 306 ProSiteProfiles NAC domain profile. 18 177 IPR003441 GO:0003677|GO:0006355
Phco11g02242 306 FunFam NAC domain-containing protein 35 27 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02242 Phco-Chr11 20593554 20598240 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco11g02242 NAM 1.3e-36 No_clan