Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02236 ATGCTCTTATCTAGCAGTTATGATGGCTTAATAGTTAAGTGGATTCAAGGGATTGGATATAGTGGAAAAGTACAAATGAATGAAGGTTCTCAAATCAAATGCATAGTAGCTGTAGAAGAAGAGATTTTTACATCTGGATTTGATAATAAGGATCAAGCTGGATCTGATACATGGGAAGAGATACAAAAGATGAAATATACATGGAGAGTGGCTCAGGAGTTGATGAGGATGATCCCTCCCTTGTTTGGCAGCTTTAGGAAAGCACTTAAAGATAGTAGCTACCAAGGATGTGACATACCAAAAGGGTGGCAGGTGTATTGGGCATATGGAACCCATATGAACGATGATATATTTGAGAATCCACAAAAGTTTGATCCATCTCGTTTTGAGAATCCAACAAAGCCAATTCCACCTTATTCTTACCTTCCATTTGGTGCAGGGATTCATTATTGCATAGGAAACGAGTTTGCCAGGATTGAGACCTTGATAACCATTCACAACATCGTGAAACTGTTTGAATGGTCTCAAGTAAACCCAGAGGAACCAATTACCCGTCAACCAATGCCATATCCCTCCATGGGGAAAAAGCCAATAACCCTCCTAAGTTCAGAGGAAGCCAAAAGTTTACAAGTTAAGCTAGATAGGATAGTGCATTTTTTAGTACTTGCATCAATACAACACGAGGATTTTCCAATGACATGGGACATTCCTTTGAGAATTGCCATTGAAGTTGCTGGAGCTTTGTTTTACTTGCACTCTGCTGCTTCTCCGCCTATTTATCATAAAGATATCAAGTCAACCAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGTACATCTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGGACAGTTTGCGGCGCGGTGCTGCTTGGTGGGGGTAGTCTCTCCGTGGATTTGAGGGGTGCGGAGGGCAGCGAAGTGGAAGGTCTTGGAAGGGAAGGTGATGCGGAGGTGACAGGAAGGGGAGTAAATGTTGCTGGTCTGAGGAAGTTTAGTGGGACCGACAAGGTGGTCCCTACTTCGTCAGATTATGGTTCTGACCACGAGATGGGTGGTAGTTACATGAGTTGCGAGTTTAATCGTGTCCCTCGGGCCAGTTATGGAGGGAAGGATGACTTGATGGTGGTTGCGGCATCGAATACATGTGCAAAAGGAAACTCGTTAATAAGGAAAGTTTCTCGGGTTCTGTTCTCGGGTTCAGATCACAAGCCAAGTCCCAACCAGTCTTCTGCAAGTGTAGTGCGGTAA 1305 0.4307 MLLSSSYDGLIVKWIQGIGYSGKVQMNEGSQIKCIVAVEEEIFTSGFDNKDQAGSDTWEEIQKMKYTWRVAQELMRMIPPLFGSFRKALKDSSYQGCDIPKGWQVYWAYGTHMNDDIFENPQKFDPSRFENPTKPIPPYSYLPFGAGIHYCIGNEFARIETLITIHNIVKLFEWSQVNPEEPITRQPMPYPSMGKKPITLLSSEEAKSLQVKLDRIVHFLVLASIQHEDFPMTWDIPLRIAIEVAGALFYLHSAASPPIYHKDIKSTNILLDEKYRAKVADFGTSRMISSDVTHLTTVVQGTVCGAVLLGGGSLSVDLRGAEGSEVEGLGREGDAEVTGRGVNVAGLRKFSGTDKVVPTSSDYGSDHEMGGSYMSCEFNRVPRASYGGKDDLMVVAASNTCAKGNSLIRKVSRVLFSGSDHKPSPNQSSASVVR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02236 434 SUPERFAMILY Protein kinase-like (PK-like) 225 303 IPR011009 -
Phco11g02236 434 Gene3D Transferase(Phosphotransferase) domain 1 217 307 - -
Phco11g02236 434 SUPERFAMILY Cytochrome P450 54 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 PANTHER CYTOCHROME P450 26 37 191 - -
Phco11g02236 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Phco11g02236 434 Gene3D Cytochrome P450 36 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 PRINTS E-class P450 group I signature 151 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 PRINTS E-class P450 group I signature 107 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 PRINTS E-class P450 group I signature 34 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 PRINTS E-class P450 group I signature 141 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 Pfam Cytochrome P450 51 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco11g02236 434 Pfam Protein kinase domain 239 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02236 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 144 153 IPR017972 GO:0005506|GO:0016705
Phco11g02236 434 ProSiteProfiles Protein kinase domain profile. 47 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02236 434 Coils Coil 433 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02236 Phco-Chr11 20483609 20491158 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco11g02236 Pkinase 7.2e-11 CL0016