Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02231 ATGGGGTGCTTCTTCGCTTGCTTCAGAGCGCGCGACTCCGCCACCGCAGCAACCACCACAGTGCCTTCTTCTCGTTCCGGCAAACACAAACCCGACGATGTTGTGGTCGCTCGAAATCGGTTATCCACTCTGTTTCTCTCTGAAGAGAGAGAAGACTCTGATGTGCGTGATGGCGTGAAGGATTTTGAAGTGCGATCTCAGAAAGGTGGCAGTGAGGCCAAGTTTCTCAAAGCTGGCGGTACTTCGGCTAGGATCCCTTTTGAGAAAGTCCACCATGGGAGTCCACCTTTCAATCCCTCAACTCCTATAAAATGTTGTGAGGAAGGGGGGAAGAGAACGGATTATTTTGAGCAAACACCAAGCAGCTGTATCTCCAATGCACAAAGCAGTCAATGTGCCTCTCTTGATTCTACGGAAGGAATTAGGACAGGGAATCATCAGAGTTTGGATAAGAATGAAAATACAGCTTCTGTTTCACCTTGGCCATCAACCACATACACTAAGAGGAACAAGTCTGTACGTTTTAAATGTGATGCTGATTTGTCGTCCTGTGACTTGTCTGATTGTGGCGGACGACACATGAAGAAAACAGATTCCCCAGACAATGAGAGTGCCTATAAACCATCACCTTATTCCACCCCAATGAAGCTATCTGATGAGATGCAAACTCCTGGAACTGTTTACCCTACAACAAAAGAAGACTTGCCAAATGTTAGGCCTCGACTTAAGTCCCAGTTTGTGTATCCAATTAACAACCCTGATGATATTGTCTCTCAGAAGATACTTGAGGAAGATAGTCATACCCAAGATTCAAGGAAGCTGAGTGAATCAGTTGAACGTTCTGAAATTACAGTTTCAACGCCTGATAAAGGATCAAAGAAAATTTCTTGTGAAGATGAATGTAAGGTGGAGGAAAGCTTATCTTCCTGGTTGAAGCCTGCGGCTGTCATTCTGGAAGAGAGAAACAGGAGAATGCAGATTGCTTATAATCATGTCCGAAAATCACCGGTCGATAGGCCTATCATTGGGATGGTTGCAGCTCACTGGAACGAGAATGAGGATTCTCAAGTTCCTCCTCCTAAGTGGTGGGATGGTAACGGCATACCAAATTCAACCAATAAGTATAAAGAGGATCAGAAAGTGAATTGGCATGCAACGCCATTTGAAGAGAGGTTGGAAAAGGCATTATCTGAGGAGAGTGTTATCTCTCAAAGGAAGGATGGATGTGGAAAATCAATTCCTTTTGACGAGAACGAAGAAAGTGATACTGCACTATCTCAGCTACAATCCTCAACTCATCCACAGTCCGTGGTGTCATTCTGA 1323 0.4475 MGCFFACFRARDSATAATTTVPSSRSGKHKPDDVVVARNRLSTLFLSEEREDSDVRDGVKDFEVRSQKGGSEAKFLKAGGTSARIPFEKVHHGSPPFNPSTPIKCCEEGGKRTDYFEQTPSSCISNAQSSQCASLDSTEGIRTGNHQSLDKNENTASVSPWPSTTYTKRNKSVRFKCDADLSSCDLSDCGGRHMKKTDSPDNESAYKPSPYSTPMKLSDEMQTPGTVYPTTKEDLPNVRPRLKSQFVYPINNPDDIVSQKILEEDSHTQDSRKLSESVERSEITVSTPDKGSKKISCEDECKVEESLSSWLKPAAVILEERNRRMQIAYNHVRKSPVDRPIIGMVAAHWNENEDSQVPPPKWWDGNGIPNSTNKYKEDQKVNWHATPFEERLEKALSEESVISQRKDGCGKSIPFDENEESDTALSQLQSSTHPQSVVSF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02231 440 MobiDBLite consensus disorder prediction 419 440 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 352 374 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 399 418 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 134 165 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 399 440 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 263 279 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 263 294 - -
Phco11g02231 440 MobiDBLite consensus disorder prediction 203 222 - -
Phco11g02231 440 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 406 IPR039300 GO:0007142
Phco11g02231 440 MobiDBLite consensus disorder prediction 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02231 Phco-Chr11 20392688 20396320 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02231 11 20392688 20396320 Phco11g02231 11 20392688 20396320 ECH
Phco11g02231 11 20392688 20396320 Phco3g01041 3 8913297 8917246 PCT
Phco3g01055 3 9003896 9010924 Phco11g02231 11 20392688 20396320 PCT