Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02139 ATGCTAATGCCAGCTACACTTCAAAAAATGTCAAAATTTTCTGTGACCCCTTCACCATTATGTGTCCAAAATCCAAATTCCACAGTCAATTGCATCAGCATTATTGTGCAGGAACAGATATGGCATCATGCAATGCTTTTAAGGGCTTGTTGTTCTTTTTTTTCTGGTATTGTTCTGCCATTCCTGCACCTATCTATGCTCATTGGGTCTGTTGGGGTTCTGAGAGAAGGCCCTTTGTTGCTCCTAATACCTGAATTGCCGCAAATTGGTTTGAATGCTGCTGCCAGATTATTTTGGTGGACATATTTGATTGACGACTTGTGGGATCCAACTATGTCAGAAAACAATTCTTTGCATGTGGAATTATCCAAGAAGACTTCGTTTTTGGGATTGAAATTATGGGTTTTGATTGGAATTGGTGTTGGTGCTTTTATAGTTCTGATTCTTTGTGTATTATCTGTATGGGTGATGTTCCGGAGAAAGTCTAGGAGATCTCTGGACAAGTTCTCTTTGTCACAAATACCGCATGTCTCGAAAGACATCAGAGTTGACAAGGTTGGGGTGCAGACTTCTTATGATCAAGCAGAAAGCGTAGCTATTCCTGTTCATGACAAAGCAAATGAGAACAATTCTGACAAGTTGTTAGTTCATTTGCGCAAGAGCAAATCTGGCGATGCTGATAATATCAGTCAGTGCAGCTCAGTTTATCATCATGAGAGAGGATTTAGTTCAATGTCTGGGGAAGAAGGAAGCTCGGGGACTGTTAAGAAGCAGTCTGCGTTGACATTTGGAGGAGTGGTAACTGCCTCTCCTCTAGTTGGCTTGCCAGAAATTTCTCATCTTGGGTGGGGTCACTGGTTCACACTTAGAGATCTGGAACTTGCAACCAATCGCTTCTCTCCAGAGAATGTGATTGGTGAGGGTGGGTATGGGGTTGTTTACAGGGGAAGATTGATCAATGGATCTGAGGTGGCGGTTAAGAAAATCCTTAACAACTTGGGACAAGCAGAGAAAGAGTTCAGTGTGGAAGTGGAGGCTATTGGCCATGTTAGACATAAAAATCTTGTGCGCTTACTTGGTTATTGTATAGAAGGAGTTCACAGGTTATTGGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGCTACATGGGGCTATGAGCCAACAAGGGACACTTACCTGGGAAGCTCGGATGAAAGTTATAACTGGCACAGCCAAAGCGCTGGCTTATTTGCATGAAGCAATAGAACCGAAAGTTGTTCACCGGGATATCAAGTCAAGCAACATATTGATTGATACCGAGTTCAATGCAAAGGTTTCTGACTTTGGTTTGGCCAAACTTCTGGACTCGGGAGAAAGTCACATTACAACTAGAGTAATGGGAACGTTTGGTTACGTGGCACCAGAATATGCGAATACAGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGTAGTTACTGGAAGGGATCCTGTGGACTACTCACGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGAAAGGCTGAGGAAGTTGTGGATTCAAGGCTTGAAGTGAAACCATCAACACGGGCTTTAAAGCGTTCTCTTCTGGTTGCACTTAGGTGTGTTGATCCTGAAGCAGATAAGAGGCCTAAAATGAGTCAGGTTGTGAGAATGCTTGAAGCCGATGAATATCCATTCCGAGAGGATCGAAGAAATAGAAAGAGCCGCACTGCCAGCATGGAAATTGAATCCCTGAAGGATATTTCCGGCCCATCTGACGCTGAAAATATGAAGGGTTCTGAAGGCCATGCACGAGAAACAACTGAAGGATAG 1866 0.4303 MLMPATLQKMSKFSVTPSPLCVQNPNSTVNCISIIVQEQIWHHAMLLRACCSFFSGIVLPFLHLSMLIGSVGVLREGPLLLLIPELPQIGLNAAARLFWWTYLIDDLWDPTMSENNSLHVELSKKTSFLGLKLWVLIGIGVGAFIVLILCVLSVWVMFRRKSRRSLDKFSLSQIPHVSKDIRVDKVGVQTSYDQAESVAIPVHDKANENNSDKLLVHLRKSKSGDADNISQCSSVYHHERGFSSMSGEEGSSGTVKKQSALTFGGVVTASPLVGLPEISHLGWGHWFTLRDLELATNRFSPENVIGEGGYGVVYRGRLINGSEVAVKKILNNLGQAEKEFSVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMSQQGTLTWEARMKVITGTAKALAYLHEAIEPKVVHRDIKSSNILIDTEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEVVTGRDPVDYSRPANEVNLVEWLKMMVGTRKAEEVVDSRLEVKPSTRALKRSLLVALRCVDPEADKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESLKDISGPSDAENMKGSEGHARETTEG 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02139 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Phco11g02139 621 FunFam Putative receptor-like serine/threonine-protein kinase 375 585 - -
Phco11g02139 621 SUPERFAMILY Protein kinase-like (PK-like) 283 572 IPR011009 -
Phco11g02139 621 ProSitePatterns Protein kinases ATP-binding region signature. 305 328 IPR017441 GO:0005524
Phco11g02139 621 FunFam Putative receptor-like protein kinase 281 374 - -
Phco11g02139 621 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02139 621 MobiDBLite consensus disorder prediction 577 592 - -
Phco11g02139 621 CDD STKc_IRAK 305 571 - -
Phco11g02139 621 Gene3D Transferase(Phosphotransferase) domain 1 375 588 - -
Phco11g02139 621 ProSiteProfiles Protein kinase domain profile. 299 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02139 621 PANTHER OS01G0323000 PROTEIN 112 593 - -
Phco11g02139 621 Gene3D Phosphorylase Kinase; domain 1 281 374 - -
Phco11g02139 621 MobiDBLite consensus disorder prediction 577 621 - -
Phco11g02139 621 SMART serkin_6 299 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02139 Phco-Chr11 18257027 18261842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco11g02139 Pkinase 1.4e-47 CL0016