Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02136 ATGTTGCCTCGTATTCTCATTACTAGACTATCTGCGTCCTTCACAGACCACAGAACCACCCAATTCCAATTGGGTTCTCTGCTGCTACACAAACACAATGTCATTCTTTTTATCTTCAAAACATTCACTTCTGGTGGGAACAGTCTCAAAGGTGTCACCTTTACCGTGTCTTACCTCATCAGCTCATGTGGGTTGTCCCTGGAATTGGCTAAGGAACTCTCCAAGAGAGTGAAATTGAAAACCCCAGATGGTCCAAATGCTGTTATTGACACTCTCAAGAACTATGGATTCTCCAAAGCTCTGGTTGCAAAACTCGTCGAGAAGAATCCCAGGTTGCTTGCTGCAAAGGTAGAGACGACCCTTTTACCCAAACTCGAGTTCTTCCACTCTATTGGGGTTTCCAACATTGACATGCATAAGATCGCACTTGAAAGCCCCCTTATCTTGGAGAGTAGTCTGGAAAAAATCCTTGTGCCACGATACGAGATTATCAGGCGTATAGTTGGTGATGATCGGAAAGTTGTTAAAGTTTTGACAAGAGCCCCATTTAGCTTCACCGTGTGTGACCTAAGCAAATGCTTGGTTCCAAACATTGAGGTTTTGAGGCAGTTTGGTGTGCCTCAGGGTTCTATATCTCTACTGGTGGTCAATTTCCCCAGTGCAACAATGTGGAAGCATTCCAGATTTGTGGAAGTGGTCGAGAGAATTAAGAAATTTGGGTTTGACCCTAAGAGAACAAGTTTTGTCATGGCTATCCAAGTGCTTATAACTATGCATAAAGAGGCATGGGAAACTTGA 798 0.4361 MLPRILITRLSASFTDHRTTQFQLGSLLLHKHNVILFIFKTFTSGGNSLKGVTFTVSYLISSCGLSLELAKELSKRVKLKTPDGPNAVIDTLKNYGFSKALVAKLVEKNPRLLAAKVETTLLPKLEFFHSIGVSNIDMHKIALESPLILESSLEKILVPRYEIIRRIVGDDRKVVKVLTRAPFSFTVCDLSKCLVPNIEVLRQFGVPQGSISLLVVNFPSATMWKHSRFVEVVERIKKFGFDPKRTSFVMAIQVLITMHKEAWET 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02136 265 Pfam mTERF 89 244 IPR003690 GO:0003690|GO:0006355
Phco11g02136 265 Gene3D Transcription termination factor 3, mitochondrial 56 188 IPR038538 -
Phco11g02136 265 PANTHER CGI-12 PROTEIN-RELATED 54 264 IPR003690 GO:0003690|GO:0006355
Phco11g02136 265 SMART mt_12 175 207 IPR003690 GO:0003690|GO:0006355
Phco11g02136 265 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Phco11g02136 265 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02136 Phco-Chr11 18246802 18247599 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco11g02136 mTERF 7e-20 No_clan