Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02130 ATGGTGTCCTCCATGGAATTCCTAAGGCTTGCAAATTGGCTCATGAACCAGGTTCTTGTTAAATCATGTTATGGAATAGCAAGGAAAATTAAAAACCATGGTTTTCATTGGGGTGATCTTTCATCTAAACCATTGCAACAATCTTCCTCATTCCCTAATATCATCAAGTGTGATTTGGAGGGTAGAGGGTCTCAAACCCTTGCTTGTGACTTCCACAAAGTCCTCTTAAGGACTCATTCCTTCTTTCCTTATTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATTTTCAGGGCATTTCTCTTGCTTTGTTCATGTCCTATACTCTGGATTCTGAACTATGAAATGAAGCTCAGAGTCATGATCTTCATCTCCTTTTGTGGACTCAAAGTGAAGGACATGGAGAACACTTCAAGGGCTGTTTTACCAAAGTTTTACTTGGAGAACCTTAATCTTGAGGCCTATGAGGTGGTGGCTTCAGTAGGCTCCAGGGTTATCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAGTTGCACACTGCTGGTTGTTACTTCACTGGTTTGCTCTCTAAGTCTGGTTTGCTTGTGAAGCACAGTGCCCTCATGGATTATTTTGGAGATACAAAACCTGACCTTGGCATTGGTAACACAAGTCTTCATGATCAACTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATGAATGAGGGAAAAGTGATACCAAGGAACAAATATCCAAAGTCCTTAATATTTCATGATGGAAGACTAGCATTCTTGCCAACTCCTTTAGCAACACTCTTCATGTTCATGTGGCTTCCAATTGGATTTGTGATGGCCCTTTACAGAATTTTTCTGGGTGTGTTCCTTTGTTTCAAATTCACGATGGCATTAGGAGTGTGGAGTGGGATAAATCTGAATTTCAAAGACAATAACCAGCAAAAATCAAAGTCAAATGAAGGGGTGCTTTATGTTTGCACTCACAGGACTCTCTTGGATCCAATTTTTCTTAGCTCATGTTTGGGGAGGCCTTTGACTGCAGTCACATACAGCTTAAGCAAGGTATCTGAGTTTATAGCCCCTATTAGGACCATAAGACTCACAAGGGACAGAAAACAAGATGGGGACACTATGAAAAGGTTGCTTAGTGAAGGGGATTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCCTATCTGTTGAGGTTTAGTTCCTTGTTTGCAGAACTAGCTGATGAGATTGTGCCTGTGGCTATGAAGGCTCAAGTGAGCATGTTCTATGGGACCACAGCAAGTGGCCTAAAGGTGTTGGATCCAATTTACTTTTTCATGAATCCTAGGCCTAGATATGACATTGAGATCCTTGAAAAGGTTCCCAAAGAACTCACTTGTGCTGGGGGAAGGTCTAGTCATGAAGTGGCAAATTACATACAGAAACAATTGGGGTATGCTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGGAATGAAGGGGTTGTACAAGAAAAGAAGGGAAGAATATTCTGCTAA 1599 0.419 MVSSMEFLRLANWLMNQVLVKSCYGIARKIKNHGFHWGDLSSKPLQQSSSFPNIIKCDLEGRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPILWILNYEMKLRVMIFISFCGLKVKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVIFTTMPRVMVEGFLKEYLNADAVIATELHTAGCYFTGLLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVVMNEGKVIPRNKYPKSLIFHDGRLAFLPTPLATLFMFMWLPIGFVMALYRIFLGVFLCFKFTMALGVWSGINLNFKDNNQQKSKSNEGVLYVCTHRTLLDPIFLSSCLGRPLTAVTYSLSKVSEFIAPIRTIRLTRDRKQDGDTMKRLLSEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMKAQVSMFYGTTASGLKVLDPIYFFMNPRPRYDIEILEKVPKELTCAGGRSSHEVANYIQKQLGYALGFECTNLTRRDKYMMLAGNEGVVQEKKGRIFC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02130 532 SMART plsc_2 336 437 IPR002123 GO:0016746
Phco11g02130 532 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 259 524 - -
Phco11g02130 532 CDD LPLAT 326 496 - -
Phco11g02130 532 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 526 - -
Phco11g02130 532 Pfam Acyltransferase 324 431 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02130 Phco-Chr11 18145796 18148181 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02130 11 18145796 18148181 Phco3g00231 3 1682284 1685139 PCT