Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02128 ATGCTTCACTCAACATGCTTCTTCTCACTTTTCCTATCGTTTACGCTTCACTTATCAGGGATCAATTCCGCCAAAATGACTTTCATCAACCAATGCAACTGCACGGTGTGGCCGGCTTTGACCAGTAACGCACCCGTGAATCTTTCAACCACCGGGTTCGTTTTGCCAAGCGGCCAAAATTCCAGTGTCAACGTACCCGTGAATTGGAACGGTCGAATCTGGGGCCGCACACTCTGCACCACCGACACAGTTACCGGAAATTTCTCATGTGTTACCGGCGACTGCAATTCCGGCAAGATAGCATGTGACAGTGTAGGATCACCACCGAACACGCTGGTGGAGTTCGGCTTAGACAGCTACGGCGGGCTTGACTTTTATGACGTGAGCTTGGTGGACGGGTTCAACATGCCGGTGATTGTTGTTCCCGTGAGTGGTTCTGGCAGCAATTGTGAGAGCACGGGGTGCGTGCTGGATTTAAACGCAGTGTGTCCGACGGAGCTAAAGGTAACCAGAAATGAGGAAGTGGTGGCATGTCAGAACCCTTGCAGTGCGTTCAAAGAGGACTATTTTTGTTGCGTTGGAAACCGTTCCTCGTGCGAACCAAGTGTGTACTCCAAAATATTCAAGACGGCATGTCCCCAAGCCTACAGCTACCCGTATGACGACCAAACCAGCACCTTCACCTGTTCCACTCCTGCAGACTACAACGTTGTCTTCTGCCCTAAATCTAGCAATGCCAGTCAAAGGGTTGGTGACTCACTCATTGCTGGTAATGAGACATCTAAGTGGCTTTCCCCTTCAGGTGATTTTGCCTTTGGCTTCTACCAACTTCCTAATAAGCTTTTCTTACTAGCTATATGGTACAACCGGATACAAAATATGACCATCATTTGGTCTGCAAATGGAGACAACCTTGCTCCAATAGGATCAAAGTTAGAACTAAATGATTCTCGTGGACTAGTACTAAAAAACCCTCAAGGTTTAGAGTTATGGACATCAAATTTTACATCAGGTACAATTTTTAATGGTCTTATGAATGATGATGGAAATTTCCAACTATTAGATCAAAACTTTGTGTCATTATGGGAGAGTTTCTCTCATCCAACTGATACATTGGTACCTACTCAAGTACTGGAGTTAGGTGGAGAACTCTTTTCTCGACAAGGAGAGTTCAACTTTTCAACTGGAAGGTTCAAACTTCATCTACAAGAGGATGGGAATCTTGTGTTTAAGCTTGTAAATTTGCTTAGCAACAATAGTTATGAGCCTTACTTTGATACTGGCACTGCTGATGCAAAGAACAAAACAAATGTTGGCATCAAATTTGTATTTGATAAATCAAGCTTCTTGTATGTACTGAAGAAAAGTGGGGAAAAGTTTATTGTCAGCACATCAAACAAGACAATCTCTTCTAATGATGTCTACTACAAAGCAACAATCAATTATGATGGAGTTTTTACTGTATCATATTACCCCAAAGATCCAAAAAAAGAACAAAGGTGGGTCACTTTAACGACAATACCAGAAAATATTTGTCTAGATTGTATTTTCAATGATGGTGGGGGAGTTTGTGGCCTTAATAGCATATGTAACCTGAAAGATGACCAGAGGCCCATGTGTAATTGCCTAGAGAGATATTCTCTAATTGATTCAAATAACATGTATGGTGGTTGCATACCGAATTTCCAAGTCATTTGTCAAGACATGGGTTCACAAGATGAATACATGATGAAAGAGTTGCAAAACACTGATTGGCCAAAATCTGATTATGAAACAATAAGTCCTTGTACTCTAGAAGAGTGTACAACATATTGTTTGCAAGATTGCTTATGTGTGTTGGCTACTTTCAGTGGAAATTCTTGTTGGAAGAAGAAGTTGCCGCTCACAAATGGGAGAAGAGGTAAAAAAGTAAATGAAACTTCTATTATGAAATTGGTGAAAAATAATGAGCTCTTGACCCCTTTCCTGAAACAAAAGATGAAAAAAGATCATGATACCTTGATCATCGTGATATCAGTTCTTTTAGGCTTCTTAGTGTTGGTCGTTTTAATGTTGGTTGGTGCAATGTATTGTGGTTTCTCCTACAACCGCAAGAAGATCAAAAGTGGTAGAACCAACAATGGTGTTATAGAGAAAAACTTGCGTAACTTCACCTTCAAGGAACTTGTAGAAGCAACAGGGAACTTTAGTGAAGAATTGGGAAGGGGATCTTTCAGCATTGTCTACAAAGGAACAATAGACATGACTAGTTTGGCTATTAAGAAATTAGACAAGTTGTTTCGAGACAATGACAAGGAATTTCAGACTGAAATGAATGTAATAGGTCAAACTCATCATAGGAATCTGGTTCGTCTACTTGGATACTGCAATGAAGGACAACACAGAATTTTGGTGTATGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCACCCCTTTGAAAGCAAATTGGAGACAACGATTTGAAATTGCCTCTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCATCCAAATCATCCACTGCGACATAAAGCCACAAAATATACTTCTAGATGATCAATATAATGCCAGAATTTCAGATTTTGGATTGGCAAAGCTATTACTGATCAATCAAAGCCACACTGAAACTGGAATTAGAGGAACAAAAGGGTATGTCGCACCAGATTGGTTTAGAAGTTCACCAATCACTCCTAAAGTTGACACTTATAGTTTTGGTGTGTTGTTATTAGAGATAATTTGTTGTAGGAGGAATGTAGAAAAGGAGTTTATTGATGAAGAAAAAGGGATATTGACAGATTGGGCATATGATTGCTTCAAGACTAGAAGACTAGACATTCTTCTAGAAAATGATGATGAAGTTATTAAGAACATTAAGAGTTTTGAAAAATTTGTGATGATTGCTCTTTGGTGCATTCATGAAGATCCCTCTCTTAGACCAACAATGAAGAAGGTTTTACTAATGCTAGAAGGAATTGTTGAAGTTTCAATACCCCCAAATCCCTACCTTTATGGTTCTGCCAATTAA 3042 0.3997 MLHSTCFFSLFLSFTLHLSGINSAKMTFINQCNCTVWPALTSNAPVNLSTTGFVLPSGQNSSVNVPVNWNGRIWGRTLCTTDTVTGNFSCVTGDCNSGKIACDSVGSPPNTLVEFGLDSYGGLDFYDVSLVDGFNMPVIVVPVSGSGSNCESTGCVLDLNAVCPTELKVTRNEEVVACQNPCSAFKEDYFCCVGNRSSCEPSVYSKIFKTACPQAYSYPYDDQTSTFTCSTPADYNVVFCPKSSNASQRVGDSLIAGNETSKWLSPSGDFAFGFYQLPNKLFLLAIWYNRIQNMTIIWSANGDNLAPIGSKLELNDSRGLVLKNPQGLELWTSNFTSGTIFNGLMNDDGNFQLLDQNFVSLWESFSHPTDTLVPTQVLELGGELFSRQGEFNFSTGRFKLHLQEDGNLVFKLVNLLSNNSYEPYFDTGTADAKNKTNVGIKFVFDKSSFLYVLKKSGEKFIVSTSNKTISSNDVYYKATINYDGVFTVSYYPKDPKKEQRWVTLTTIPENICLDCIFNDGGGVCGLNSICNLKDDQRPMCNCLERYSLIDSNNMYGGCIPNFQVICQDMGSQDEYMMKELQNTDWPKSDYETISPCTLEECTTYCLQDCLCVLATFSGNSCWKKKLPLTNGRRGKKVNETSIMKLVKNNELLTPFLKQKMKKDHDTLIIVISVLLGFLVLVVLMLVGAMYCGFSYNRKKIKSGRTNNGVIEKNLRNFTFKELVEATGNFSEELGRGSFSIVYKGTIDMTSLAIKKLDKLFRDNDKEFQTEMNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKANWRQRFEIASGIARGLVYLHEECCIQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSSPITPKVDTYSFGVLLLEIICCRRNVEKEFIDEEKGILTDWAYDCFKTRRLDILLENDDEVIKNIKSFEKFVMIALWCIHEDPSLRPTMKKVLLMLEGIVEVSIPPNPYLYGSAN 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02128 1013 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 254 1005 - -
Phco11g02128 1013 ProSiteProfiles Thaumatin family profile. 23 241 IPR001938 -
Phco11g02128 1013 Pfam Thaumatin family 30 241 IPR001938 -
Phco11g02128 1013 SMART tha2 26 241 IPR001938 -
Phco11g02128 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Phco11g02128 1013 SMART blect_4 252 368 IPR001480 -
Phco11g02128 1013 SUPERFAMILY Protein kinase-like (PK-like) 710 995 IPR011009 -
Phco11g02128 1013 ProSiteProfiles Protein kinase domain profile. 727 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02128 1013 SMART serkin_6 727 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02128 1013 ProSiteProfiles Bulb-type lectin domain profile. 245 366 IPR001480 -
Phco11g02128 1013 Pfam D-mannose binding lectin 295 378 IPR001480 -
Phco11g02128 1013 Gene3D Transferase(Phosphotransferase) domain 1 802 1002 - -
Phco11g02128 1013 Gene3D - 368 506 IPR036426 -
Phco11g02128 1013 SUPERFAMILY Osmotin, thaumatin-like protein 24 242 IPR037176 -
Phco11g02128 1013 FunFam Serine/threonine-protein kinase 369 515 - -
Phco11g02128 1013 Gene3D Phosphorylase Kinase; domain 1 690 801 - -
Phco11g02128 1013 FunFam THAUMATIN-LIKE PROTEIN 1 24 241 - -
Phco11g02128 1013 Pfam Protein kinase domain 730 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02128 1013 SUPERFAMILY alpha-D-mannose-specific plant lectins 282 429 IPR036426 -
Phco11g02128 1013 Gene3D Thaumatin 24 241 IPR037176 -
Phco11g02128 1013 FunFam S-receptor-like serine/threonine-protein kinase 696 801 - -
Phco11g02128 1013 ProSitePatterns Protein kinases ATP-binding region signature. 733 755 IPR017441 GO:0005524
Phco11g02128 1013 CDD STKc_IRAK 733 997 - -
Phco11g02128 1013 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Phco11g02128 1013 Gene3D - 249 367 IPR036426 -
Phco11g02128 1013 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 802 1002 - -
Phco11g02128 1013 CDD TLP-PA 27 240 - -
Phco11g02128 1013 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Phco11g02128 1013 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Phco11g02128 1013 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Phco11g02128 1013 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Phco11g02128 1013 FunFam Serine/threonine-protein kinase 243 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02128 Phco-Chr11 18083061 18092167 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco11g02128 Pkinase 3.7e-47 CL0016