Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02124 ATGCACTGCACGATCTTGGCACCTGCTTTCTGTTGTTGTTCTTCTGGTTTGGCTTTGTGGGGTGTAACAAATTGTGGTTTTTTGGTCGAGGTTTGGTGGTTTTGGAAAGGGAAGGTGCATGTGGGATCTCAATTGGGTTCTATGTTTGGTGAAGAAGGGTTTGGGGGAAGGGAGAATAAGTTGGCACTGTTGTGGTTTGGGCTTGATCTTCACTCTATAGCTACAGAGATGGACTTTTTCTCTGAATATGGTGATGCCAACCAGTACAGGATTCAAGAAGTCATTGGAAAGGGTAGCTATGGTGTTGTCTGTTCAGCCATTGACACTCACACTGGAGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATACATCTGATGCTGCTCGAATTCTCCGTGAGATAAAGCTGCTCAGACTTCTTCGACATCCTGATATTGTAGAAATAAAACACATTATCCTGCCTCCATCATGGAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACACTATCAATTTTTTCTTTATCAACTACTTCGAGCACTCAAGTTCATTCATACTGCAAATGTCTTTCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGTATCTTTGCCGAAGTACTAACGGGAAAGCCACTTTTTCCTGGGAAAAATGTTGTACACCAATTGGACCTGATGACAGATCTGCTTGGGACACCTTCACTGGATACTATATCGCAGGTACGCAATGAGAAAGCAAGGAGATACCTAACTAGCATGAAGAAAAAGCAGCCTGTGTCGTTTGCTCAAAAGTTTCCCAATGCAGACCCTTTAGCACTGAGACTACTGGAAAAGTTGTTGGCCTTTGATCCAAAAGACCGGCCTACCGCCGAAGAGGCATTGGCTGATCCTTACTTCAAGGGGCTGGCAAAAGTTGAGAAGGAGCCATCTTGCCAGCCTATCACAAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACAAAGGATGAAATTCGAGAACTGATTTTCCATGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACTGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTCAGAAAGCAGTTTGCTCATCTGGAGGAAAATGGTAAAAATGGTCATGTTTTGCCACTTGAAAGAAAGCACGTTTCTCTTCCAAGGTCAACCATTGTACATTCAAATACAATACACCCAAAAGATCAAACAAACATTGCTGCCAGCAAAAACCGACCAACTGCTGAGGAATGCAACAGGAGTTCCAGAGATACTAAAATTCTAGTGCCAAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTGGGGCCAGTTGTTCCATACGAGTACGATAACATTGTCAAGGATTCTTATAATCCTAGGTCGTTTATCAGAGGTTCTGTGCTTCCTACTCAACCTGTTCCTCCAGCATACTATTATCATCAGAGATCCAGCACTGGAAACCAAGAAAGGGCGGCAACAGAAGCTGGCAAGAGTGTGCCTTTGCAAGCAACACATCCACAAGAACAAGTTGGAGTTAATGCCAAGATGGCACCTGAGATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGTCATAGATACAAACTTGTTGCAGCCAAAGACATATGGTGGAAACAGTGCTGCAGCTGGTGCCACTGCTCATAGAAAGGTAGGTCCTGTTCAGTATGGTATGACAAGAATGTTCTAG 2037 0.4153 MHCTILAPAFCCCSSGLALWGVTNCGFLVEVWWFWKGKVHVGSQLGSMFGEEGFGGRENKLALLWFGLDLHSIATEMDFFSEYGDANQYRIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHTSDAARILREIKLLRLLRHPDIVEIKHIILPPSWKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKFIHTANVFHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISQVRNEKARRYLTSMKKKQPVSFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEKEPSCQPITKMEFEFERRRVTKDEIRELIFHEILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGHVLPLERKHVSLPRSTIVHSNTIHPKDQTNIAASKNRPTAEECNRSSRDTKILVPRSMQGPQRIPLAKPGKVVGPVVPYEYDNIVKDSYNPRSFIRGSVLPTQPVPPAYYYHQRSSTGNQERAATEAGKSVPLQATHPQEQVGVNAKMAPEIAINIDTNPFFMTRAGVNKLEQGDQIVIDTNLLQPKTYGGNSAAAGATAHRKVGPVQYGMTRMF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02124 678 FunFam Mitogen-activated protein kinase 79 182 - -
Phco11g02124 678 Pfam Protein kinase domain 89 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02124 678 SUPERFAMILY Protein kinase-like (PK-like) 86 384 IPR011009 -
Phco11g02124 678 SMART serkin_6 89 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02124 678 ProSitePatterns MAP kinase signature. 124 227 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phco11g02124 678 ProSitePatterns Protein kinases ATP-binding region signature. 95 119 IPR017441 GO:0005524
Phco11g02124 678 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 89 427 - -
Phco11g02124 678 Gene3D Transferase(Phosphotransferase) domain 1 175 403 - -
Phco11g02124 678 CDD STKc_TDY_MAPK 88 425 - -
Phco11g02124 678 ProSiteProfiles Protein kinase domain profile. 89 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02124 678 FunFam Mitogen-activated protein kinase 175 403 - -
Phco11g02124 678 Gene3D Phosphorylase Kinase; domain 1 104 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02124 Phco-Chr11 18009000 18015619 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco11g02124 Pkinase 4.3e-68 CL0016