Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02109 ATGTTGTTACGTGGCGTCATCTCCGCTCCTCTTCCACCGTGTCTCAATTTCGGCCAAGTCCGGGTGCCAACATTTCCCCGAAAACTCTCCGTCGCGTCCTCCTCCCCCTACGGCGGCGATTACCCGCTCTCGGTCTCCGACGCGGCGCTGGAGTCGCGCGGGTTCTTGTTGCGGCGCGGCGCGGAGGGGCTGGACCTGGAGGAGCTGAACGCGGTGTTCGTGGCGGTTGGGTTTCCACGTCGGGACCCGGAGAAGATCCGTCTGGCGCTGGAGCACACGCAGGCGGTGCTATGGGTGGAGCACCGGAGAACGCAGCGGCCGGTGGCGTTCGCGAGGGCCACGGGAGACGGCGTCTTCAACGCCATCATATGGGACGTGGTGGTGGACCCGTCGTTCCAGGGCATCGGGCTCGGCAAGGCCGTCATCGAGAGGCTGCTGAAGGAGCTTCTTGGAAGAGGAATTTCCAACATTGCCCTTTATTCGGAGCCCCGCGTTCTCGGATTCTACCGCCCGTTGGGCTTCATCGCCGATCCCGATGGCATCCGGGGAATGGTTTACTCCAAAAGACAAAACAAAATAAAATAG 585 0.6188 MLLRGVISAPLPPCLNFGQVRVPTFPRKLSVASSSPYGGDYPLSVSDAALESRGFLLRRGAEGLDLEELNAVFVAVGFPRRDPEKIRLALEHTQAVLWVEHRRTQRPVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVIERLLKELLGRGISNIALYSEPRVLGFYRPLGFIADPDGIRGMVYSKRQNKIK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02109 194 Pfam Acetyltransferase (GNAT) family 81 174 IPR000182 GO:0016747
Phco11g02109 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 177 IPR016181 -
Phco11g02109 194 CDD NAT_SF 106 160 - -
Phco11g02109 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 55 192 IPR000182 GO:0016747
Phco11g02109 194 Gene3D - 60 188 - -
Phco11g02109 194 PANTHER ACYL-COA N-ACYLTRANSFERASE 43 191 IPR045039 GO:0008080
Phco11g02109 194 FunFam Putative acetyltransferase NSI 60 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02109 Phco-Chr11 17778455 17779039 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco11g02109 Acetyltransf_1 3.6e-12 CL0257