Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02070 ATGAAAGCAAATTTTGGAAAAAAGAAAATGAGTTTATTTCCTTGTTGTGCATCACAAAAGAGGCCCAACAAGATCAGATGGAAGAAGAGCATTGAGGAAGATAATGATAATAAAAGTGTGGTCTCATTTTCCAACATCTCTTTTAAATCAGATAGTGGGAAGAGAAAGTTCATAACAGATGAGATAGCAAAGCTTGGGAAAGGAAATATCAGCTCTAGGATAATTTCTTATCATGAGCTATGTGCTGCAACTCAGAACTTTCACCCTACCAACATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGATACCTTAAAAGCACTAATCAGGTGGTTGCTGTGAAGCAACTAGACAGAAATGGATTTCAAGGAAACAGAGAATTTCTTGTAGAGGTTTTAATTTTGAGTCTTCTAGACCACCCTAATCTTGTCAACTTGATAGGGTATTGTGCTGAAGGTGAACATAGACTTTTGGTATATGAATACATGGTCAATGGTTCTTTAGAAGATCATTTACTTGACTTAACTGAAGAAGCAAAGCCTTTGGACTGGCATGCCAGAATGAAAATTGCTGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGATCAAGCAGACCCTCCAGTGATATATCGTGATTTCAAAGCATCAAACATATTGTTAGATGAAAACTTCAATCCAAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACAGGAGACAAAACACATGTGTCTACCAGAGTGATGGGAACATATGGATATTGTGCTCCTGAATACGCATTAACAGGACAATTGACTACAAAATCAGATGTGTATAGTTTTGGAGTGGTGTTTTTGGAGATGATCACAGGAAGAAGAGTAATTGAATATTCAAGACCAGAAGAAGAGCAAAACTTAGTTGTTTGGGCACAACCACTTCTAAAAGATAGGAAGAAGTTTACACAAATGGCAGATCCATTGCTGAAAGACAAGTATCCCATAAAGAGTTTATACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAGGAAGATGATACACGACCTATAATCAGTGATGTAGTTACAGCCATTGAATTTTTAGCAAGGAAGAGAGTAGAAGTGGATGAACCACAACCCACAAAAGAAATTTCTCCTACTCAGGAAGAAGATAGTAATCACAACTAA 1176 0.3767 MKANFGKKKMSLFPCCASQKRPNKIRWKKSIEEDNDNKSVVSFSNISFKSDSGKRKFITDEIAKLGKGNISSRIISYHELCAATQNFHPTNMIGEGGFGRVYKGYLKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLDHPNLVNLIGYCAEGEHRLLVYEYMVNGSLEDHLLDLTEEAKPLDWHARMKIAEGAAKGLEYLHDQADPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEMITGRRVIEYSRPEEEQNLVVWAQPLLKDRKKFTQMADPLLKDKYPIKSLYQALAVAAMCLQEEDDTRPIISDVVTAIEFLARKRVEVDEPQPTKEISPTQEEDSNHN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02070 391 Pfam Protein kinase domain 89 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02070 391 FunFam Serine/threonine-protein kinase CDL1-like 58 163 - -
Phco11g02070 391 Gene3D Phosphorylase Kinase; domain 1 48 163 - -
Phco11g02070 391 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g02070 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Phco11g02070 391 CDD STKc_IRAK 93 362 - -
Phco11g02070 391 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Phco11g02070 391 MobiDBLite consensus disorder prediction 372 391 - -
Phco11g02070 391 PANTHER OS07G0668900 PROTEIN 33 372 - -
Phco11g02070 391 SUPERFAMILY Protein kinase-like (PK-like) 71 363 IPR011009 -
Phco11g02070 391 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Phco11g02070 391 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02070 Phco-Chr11 17157042 17159263 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco11g02070 Pkinase 1.5e-49 CL0016