Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco11g01973 | ATGGAAGAAGCTACCTGCAATGATGACTCTAATATTGCACCAGTTACACATTCTTCTCTGGTGTTTGATGGGAAAAGACTTGCCATGGATGAGATGGATTTCTTTGCTCAGAAGAAGAAGAAAAATGTGGTTGGTGATGATGAAATGGTGCACCAAATGGAGCTGCATGTGGATACTAGTTTAGATCTCCTCACAAAGAGTTCCCCCACCAATAGATCAACTATGGGAGAAGGATCATCGGAAGCAAAGGGTAATAGAAGAGATAATAAGTTTGCAGCTGTGCTAGCAGAACTGCACCACATGAATGCTGAAAATCAACGCTTGAGAGATCAGGTTGATCAGGTGAATGATAAGTACCATGCTCTACACAATCAGATTATGAAAATGATGGAGAAAAAACAAAAGAATGAGGGTAAGAAAGCTGATATGATTCCAAGGCCATTCTTGGATATTGGAGTTGCTATGAAGGAAGAGAGTTCGCAGCAACATTCCAAGGGAAAACAGCAAGAAAGCAAGAATCAGAAGATTTGCAGTAACAGAGATGTTACTGAGTTGGAGGCATCTGACAAAGTTATTCCAAGGTGGCTCTCAGACAGTTCTTTCAAGGATGTTGATGAAGCATCAGAAAACATGTCAATGATCAAGAAAGCTCGAGTATCAGTTCGAGCAAGATCTGTTTCTTCTATGATTTCTGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGAAATCCATGTCCAAGAGCTTATTATCGATGTTCAATGGGGACTGGTTGCCCAGTTCGGAAGCAAGTGCAAAGGAGTGCAGAAGATCAAAGTGTGTTGATCACAACATATGAAGGGCAACATAATCATGTACTCCCTCCAGCTGCCAAAGCAATGGCATCCACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCCTTCTACACCCAAACATACTAGAAAGTGCAACACTTCCATTTTCACAGAACTTAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACCATCACTTTGGATCTCACTCAAAGTGCCACCAATACTTCCTCACAGCAGCTACCACAAGAGGCACCTCAGGATTCTCAACTCAGCCTCATTTCTCCACTTTTGGCACCAAATCTTTTTTACCACCAAATTAAGCTTTCTAGCTTACATGGCTCTCAGGGAACAGAACCTGCTTCTTTTGCTGACACAGTAAATGCAGCAACAGCTGCTATCACTACAGACCCCAAATTCAGTGCAGCTCTTATGGCAGCCATAACATCAATTATTGGAAGTTCACATCCAGTGGAGACTCAGCATTGCAATAACAAATAA | 1350 | 0.4244 | MEEATCNDDSNIAPVTHSSLVFDGKRLAMDEMDFFAQKKKKNVVGDDEMVHQMELHVDTSLDLLTKSSPTNRSTMGEGSSEAKGNRRDNKFAAVLAELHHMNAENQRLRDQVDQVNDKYHALHNQIMKMMEKKQKNEGKKADMIPRPFLDIGVAMKEESSQQHSKGKQQESKNQKICSNRDVTELEASDKVIPRWLSDSSFKDVDEASENMSMIKKARVSVRARSVSSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTGCPVRKQVQRSAEDQSVLITTYEGQHNHVLPPAAKAMASTTSAAASMLLSGSMPSSDGLLHPNILESATLPFSQNLATLSASAPFPTITLDLTQSATNTSSQQLPQEAPQDSQLSLISPLLAPNLFYHQIKLSSLHGSQGTEPASFADTVNAATAAITTDPKFSAALMAAITSIIGSSHPVETQHCNNK | 449 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco11g01973 | 449 | Coils | Coil | 98 | 132 | - | - | |
Phco11g01973 | 449 | ProSiteProfiles | WRKY domain profile. | 225 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phco11g01973 | 449 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 75 | 444 | IPR044810 | GO:0003700 | |
Phco11g01973 | 449 | Gene3D | WRKY domain | 215 | 292 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phco11g01973 | 449 | SMART | WRKY_cls | 230 | 290 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phco11g01973 | 449 | MobiDBLite | consensus disorder prediction | 63 | 87 | - | - | |
Phco11g01973 | 449 | FunFam | probable WRKY transcription factor 31 | 215 | 292 | - | - | |
Phco11g01973 | 449 | MobiDBLite | consensus disorder prediction | 156 | 179 | - | - | |
Phco11g01973 | 449 | SUPERFAMILY | WRKY DNA-binding domain | 227 | 291 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phco11g01973 | 449 | Pfam | WRKY DNA -binding domain | 232 | 288 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phco11g01973 | 449 | MobiDBLite | consensus disorder prediction | 63 | 80 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco11g01973 | Phco-Chr11 | 16076920 | 16081134 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phco11g01973 | WRKY | 3e-24 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco11g01973 | 11 | 16076920 | 16081134 | Phco3g00231 | 3 | 1682284 | 1685139 | PCT |