Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01866 ATGGCTGAAACTGCAGTGGTCCTTCTAGCTGAAAGTTTGTTGAAGTTACTGAGTTATGAAGGAAAAATCTTTAGAGGGGTTGACAAAGATCTTAAACAGATCAACGCTTACCTAAACCAAATCAAACCTTTCATAAAGGATGCAGAGGACAAGGAACAGGTAGAGAATGTGAAGCAGTGGGTGAATGAGTTGAGGGAACTGGTGTTTCGCATGGAGGATGTGGTTGATCTGCATTTGCTGAAAGTGGCAAAACGTGATGAAGGAGATGGAGTTCGTGGTACAGTGGCTAAAGCTGTAGGTAAGTTCACAAGTTTTGAACATCGCAGGGGTATTGCTTCTGACATTGAAGTTATTAAAGGAACCCTAGATGGTCTCTACAAAAGGAGAATATTTCTAGAACTCAAACAATTTGATGGAGGGAGTCTTCCTAATGAAACAATTCCAAGGTGGACTCCTTTTTTGGAGGAATCTGAACTTATTGGTATTGAAGATGACATGCAAAAGCTGAGTGATTGGCTGGCAAAAAATAATTGCCCAGTGTTGGTGGTGGTAGGCCCAGCAGGGATAGGTAAAACTACAATCGTGAAGAATGTGTATAGGAAGCAAGAGCAAAAGAAACACAAGAAGGATTTTGACTTTTGTGTATGGATAACCATGCCTCAGACTCAAGCTGATGATTTCAAACTAATAAGGCAAATTAAAGAAAAGGTAGTTATGACAGACCCTCGTGCATCACCTTCATTGAGGAGTGAAACAATTGAGGATCTTGCAGAAAAATTGAGAGGATACTTGAGAGATAAAAGGTGCCTCATTGTGCTTGATGATGTGAAGGAATTAAAATTTTGGAAGACTATCCAATTTGCCATACCTCTACATCGTGTTATTATCACTACACGAAATTCAAATCTTCCAAATCGTTTTGAAAGTGATACATCTGTTGAAGTGCATAAGTTAAAACCTTTGTCTTTACAAGATGCTTTGAAGCTCTTTCACCAGAAGGCTAAGCAAGTGCAATTCCCTGAATTGAGTCATTTGTCCAAAGAATTTGTGGAAAAATGCAATCGGGTGCCACTGGCTATTGTGGCTATTTCCAATCTTCTTTCCACTAAGAAATCTGCCATTGAATGGCAAAGTGTACTTGATAATCTTGGATCATTATTGCAAAGTAACCCTCATCTTGAATTGGTCCAACAAGTAATGTTGCGAAGTTACCGAGATCTTCCTTCTCACCTCAAACATTGCTTCTTATACTTTGGCCTTTTCCCTGAAGGCTACTCCATTAGTTGCATGAGGCTTATTCGCTTGTGGGTAGCAGAGGGTTTTCTAAAAGAAGATACCGAACACAAATCAATGGAGGAATTTGGAGATGAATACCTAGATGAACTAATCTGTAGAGGATTGGTTCATATTTCTCGAGTTGATTTTGATGGAAGACCTAGAAGTTGTCATGTGTATAACCTCATGCATATGATCATAGCTAGGATTTGTGAAGAACAAGTGTTTTCTCATGTGATGGAAGATAGAAGCACACCACCTAACTCCAACATGGACTTCACTCATAGACGTTTATCAATTATAAAGAAGAAGAATTATGATAATATGAAAAGAGCCGAAAAATGGGAGAAAGTGAGGTCTTGTTTTATTTTCGATGATGCTAAGAAGTGGCAAGTGAACAACCACTTTTTCTCTAGCTTTGAGTTTTTGATTCGATTAGACTTATCTGATGCATGTCTATGTATTGATGTTCTTCCCCAACAAGTTGGAAATCTATTGCTCATGAAATACTTGAGCCTAAGGAACACCAACATCAAGTCACTTCCGAAGTCCATTGGCAACCTAGTGAATCTGCAGACTCTAGACCTAAAGCAAACTGAAGTGCATGAAGTGGAGATCAAGAAGCTTGTCAAGTTACGCCATCTCCTAGCTTACTATGTCAATTATCAAAGTTCCGATTTGGACTGTTTAGAAGGACTGAGGTTAAGTAAAGGAATTCAAAATCTAGAATCATTGCAGAGACTATCATTTTTAGAAGCAACTGATGGTAGCATTATAAATGGACTGGAAAAACTAACGAAGTTAAGGAAGTTGGGAATTATAAAGCTAGAAGAACAAAATGGTGCAGCACTATGCAAGGCTATAGAGGGCATGAAGAATCTATGTTCTCTAAGCATTGGGGCATTGGGAAAACAAGGCATGCTTAAGTTACAATCTTTAAGGAATCCTCCATTGTCACTTAAACGCCTTTACCTGTATGGGCGTTTAGGAAGTACACTTCCAGGTTGGATATCAAAACTTATACACCTTAAAAGATTGTACTTGAAGTGGTCTGATCTAAAGCAAGATCCATTACCTTACCTTAAGGATTTGCCAGAATTGCTGTACCTTGAGTTGTATGATACATATGAAGGTGTTGAGTTGCATTTCAATAATGGATGGTCGAAACTGAAGGTTTTGTGCTTAGGATTGTTGCCAAACTTGAAGACAATAAAGATTGATAAGGGACAAGTTCCTTGTCTTGAAGTGTTGAAGATAGGGAGATGCCATGGAATGATAACGGTTCCCAGAGATATACAGAACTTGAAGCATCTTCAAAAGCTTTATCTTTATGATATGCAAGAACAATTTATACGAAGATTATCTGATATGCAGAATGAAGACAATATGATTATTAGCAAAATACCTCTTGTGGAATACTCCAAGATTGACCATTTTGCCACTTTTTATGATACTGATTCTTGA 2739 0.3823 MAETAVVLLAESLLKLLSYEGKIFRGVDKDLKQINAYLNQIKPFIKDAEDKEQVENVKQWVNELRELVFRMEDVVDLHLLKVAKRDEGDGVRGTVAKAVGKFTSFEHRRGIASDIEVIKGTLDGLYKRRIFLELKQFDGGSLPNETIPRWTPFLEESELIGIEDDMQKLSDWLAKNNCPVLVVVGPAGIGKTTIVKNVYRKQEQKKHKKDFDFCVWITMPQTQADDFKLIRQIKEKVVMTDPRASPSLRSETIEDLAEKLRGYLRDKRCLIVLDDVKELKFWKTIQFAIPLHRVIITTRNSNLPNRFESDTSVEVHKLKPLSLQDALKLFHQKAKQVQFPELSHLSKEFVEKCNRVPLAIVAISNLLSTKKSAIEWQSVLDNLGSLLQSNPHLELVQQVMLRSYRDLPSHLKHCFLYFGLFPEGYSISCMRLIRLWVAEGFLKEDTEHKSMEEFGDEYLDELICRGLVHISRVDFDGRPRSCHVYNLMHMIIARICEEQVFSHVMEDRSTPPNSNMDFTHRRLSIIKKKNYDNMKRAEKWEKVRSCFIFDDAKKWQVNNHFFSSFEFLIRLDLSDACLCIDVLPQQVGNLLLMKYLSLRNTNIKSLPKSIGNLVNLQTLDLKQTEVHEVEIKKLVKLRHLLAYYVNYQSSDLDCLEGLRLSKGIQNLESLQRLSFLEATDGSIINGLEKLTKLRKLGIIKLEEQNGAALCKAIEGMKNLCSLSIGALGKQGMLKLQSLRNPPLSLKRLYLYGRLGSTLPGWISKLIHLKRLYLKWSDLKQDPLPYLKDLPELLYLELYDTYEGVELHFNNGWSKLKVLCLGLLPNLKTIKIDKGQVPCLEVLKIGRCHGMITVPRDIQNLKHLQKLYLYDMQEQFIRRLSDMQNEDNMIISKIPLVEYSKIDHFATFYDTDS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01866 912 PANTHER DISEASE RESISTANCE PROTEIN RP 52 847 IPR044974 GO:0006952
Phco11g01866 912 PRINTS Disease resistance protein signature 180 195 - -
Phco11g01866 912 PRINTS Disease resistance protein signature 611 627 - -
Phco11g01866 912 PRINTS Disease resistance protein signature 263 277 - -
Phco11g01866 912 PRINTS Disease resistance protein signature 353 367 - -
Phco11g01866 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 418 IPR027417 -
Phco11g01866 912 Gene3D - 404 495 IPR036388 -
Phco11g01866 912 Gene3D - 146 316 IPR027417 -
Phco11g01866 912 Pfam Rx N-terminal domain 6 86 IPR041118 -
Phco11g01866 912 FunFam Probable disease resistance protein At1g63360 404 494 - -
Phco11g01866 912 Gene3D - 4 112 - -
Phco11g01866 912 CDD RX-CC_like 18 119 IPR038005 -
Phco11g01866 912 Gene3D Ribonuclease Inhibitor 527 904 IPR032675 -
Phco11g01866 912 SUPERFAMILY L domain-like 522 901 - -
Phco11g01866 912 Gene3D - 321 403 IPR042197 -
Phco11g01866 912 Pfam NB-ARC domain 163 405 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01866 Phco-Chr11 14994506 15001424 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01866 11 14994506 15001424 Phco11g01866 11 14994506 15001424 ECH