Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01850 ATGGAACATGGAGGTTCCTTCTTTCACATTGATCAACATGTGAAATCAAGTTCTGTGCCATTGCAGCAAGAAAACAACTATACAAACATGGAAATTGCAGCACCAATAAACTCAGATGAATGTCAAAACCCTAATTTGATTGGAAGAGACAAGAGCAAGATGCCAATTACAAATGTGACAAAAATCATGAGAAAATTTCTTCCAAACAATGCAAAAGTCTCAGATGGGGCTAAAGAGATGATTCAGCTAAGTGCTACATACTACATTACCTTTGTAACCAAAAAAGCCAAGGAGAAATGCTTGAGTGAGTACAGAAAGATTATGAATGCAGATGACTTGTTATGGGCCATTGAAAATGTGGGCTTTGATGACTATATTGGGCCTCTTGGTACTTTTCTCCAACGTTGTCGCAACCTTGAAGGAGGTATTCATGGGCCTACTTTTGGGCCTGGGCTTAACCATGTGGAGATGCCTCACCCTCCTTTACCACCACCACCACCACCACCTCCACCACCACCAGCAGCAGTTTATTCATCTGGGTTAGATTTTTCCATGCACCAAAACACCAACCCTGACATGTTTGACACAAATGGTGTGGGTGGGTTCCTAGATGGTGTTGGTTGCTCAACTAATGCTTTCATCAACTTTGATCCTTTTTCTCTCTTCCAACAGGATCAGCTCTGA 684 0.4196 MEHGGSFFHIDQHVKSSSVPLQQENNYTNMEIAAPINSDECQNPNLIGRDKSKMPITNVTKIMRKFLPNNAKVSDGAKEMIQLSATYYITFVTKKAKEKCLSEYRKIMNADDLLWAIENVGFDDYIGPLGTFLQRCRNLEGGIHGPTFGPGLNHVEMPHPPLPPPPPPPPPPPAAVYSSGLDFSMHQNTNPDMFDTNGVGGFLDGVGCSTNAFINFDPFSLFQQDQL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01850 227 MobiDBLite consensus disorder prediction 156 176 - -
Phco11g01850 227 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Phco11g01850 227 PRINTS CCAAT-binding transcription factor subunit A signature 119 137 - -
Phco11g01850 227 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Phco11g01850 227 SUPERFAMILY Histone-fold 53 142 IPR009072 GO:0046982
Phco11g01850 227 MobiDBLite consensus disorder prediction 153 176 - -
Phco11g01850 227 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 53 117 IPR003958 -
Phco11g01850 227 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 47 142 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phco11g01850 227 Gene3D Histone, subunit A 47 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01850 Phco-Chr11 14852603 14857488 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phco11g01850 CBFD_NFYB_HMF 8.8e-16 CL0012