Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01849 ATGTTCTTAAGAACCACCATCACCACCACCATCATCTTCTTCTTCTTCATCACAATCTTCTCCTTTACAACAACAATGGCCCTCTCTCACAACAACACAAACTTCTTCTCCTTCTCCTTTCCCTCCTTCACCCTCCGCAACATAACCCTCCTTGGCGACTCCTTCCTCCGCAACGGCCTCGTCGGCCTCACCCTCTCCACCACTGTCCCTGCCTCCTCCTCCGGCACCCTCCTCTTCAACAACCCCATCACCACCACCCCTTCCTTCTCTCTCTCCACCACCTTCACCTTCTCCATCACCAACACCACCACCTCCGCCACCCCCTCCTCCACGTTCTCCTTCTTTCTCAACTCCTCCCACACCCTCCTCTACCTCCACTTCCACCCCAACCAAAACCATCTCACCCTCGACCTCACCACCACCTCAAACTCCTCCCTTACCAACCCCACTTTCGTTGATCTCAGCACTGACACTCCAATCACTTCTTGGGTTGATTATCACCATGCTGACAAGAAAAAGCTCCAAGTTTTCTTGAACTACTCGTCACCAGCCGCTTCCAAGCCTCAAAACCCTGTCTTGAGCGTTGACCTTGACCTTTATGAGTGTTTTAAGGATAGTCTCTACGTGGGGTTTTCCGGTTCCACGCTAGGAAGCACCGAGCTTATCCAACTCATGAGTTGGAGTTTGGAGTTTGAGTCAAACTTGTACCCTCTGATCAATGGTTCTAGCAGCCCTTCGAGTGTTGCGGTTGAGGGCATTCCTGTTTCTTCAAATTCCACCAAGGGTAGTAATAACCGTGGTAAGAGGTTTTTGTTTGGTCTTTGTGTTGCTTTTGCTGGTCCTGCTTTTTTCTGCGTCATGCTTGTGGTTTTGGGGTATGTTTCTTTTCTGAAATGGCGTGGTTTGAGGAATAAGAAAGGTTTTGGGACAGTGGGATGTTGTCCTAAAGAGTTTGGTTACAAGGAGGTGAAGTTGGCCACTAGGGGGTTTCATGCTTCAAGGGTAATTGGGAAAGGATCTTTTGGGACAGTGTATAAGGCTTTGTTTGAGTCTTCTGGGACCATAGCTGCGGTTAAAAGGTCAAGACAGTACGACGGGAAAACCGAGTTTTTGGCCGAATTATCCATTATAGCTAGTTTGAGGCACAAGAATTTGGTTCAACTCCTAGGTTGGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTATATGCCAAATGGAAGCTTGGACAAGGTGCTCTATCAAGAATGTGAAGGCGGTAATACTAACCATGTGTTGAGTTGGGTTCATAGGGTTAACATTGCTGTTGGGTTGGCTTCTGTTTTGAGCTATTTGCATCAAGAGTGTGAGCAGAGGGTGATTCATAGGGACATAAAGACAGGGAACATATTGCTAGATGGGAACATGAACCCAAGGTTGGGTGATTTTGGGTTGGCCAAGCTTATGGACCATGACAAGAGTCCTGTTTCAACACTAACTGCTGGGACAATGGGGTACCTTGCTCCAGAGTATCTTCAATGTGGAATGGCAAATGAGAAGAGTGATGTGTTCAGCTATGGGGTGGTGGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAGAGGGAGGGGCAGAAGATGGTGAATTTGGTGGATTGGGTTTGGGGGTTGCACTCTCAAGGGAGGATCATTGAGGCTGCTGACAGGAGGCTGAATGGGGAGTTTAAGGAAGGGGAAATGAAGAGGCTTTTGCTCTTGGGGTTGAGTTGTGCTAACCCTGATAGTGCTCAGAGGCCTTCCATGAGAAGAGTGTTGCAGATTCTCAACAATGAAGGAGGAGTGTCTCTTGTGGTGCCTAAAGAAAAACCAACACTTACTTTCTCTTCTGGCTTGCCTTTGAGTCTCGAAGACATTGTTTCTGATGCTGAGGAAGACTTGAATTCTGGCCAGGTTGTGTGTGAGATCAAAATTGATTGA 1959 0.4793 MFLRTTITTTIIFFFFITIFSFTTTMALSHNNTNFFSFSFPSFTLRNITLLGDSFLRNGLVGLTLSTTVPASSSGTLLFNNPITTTPSFSLSTTFTFSITNTTTSATPSSTFSFFLNSSHTLLYLHFHPNQNHLTLDLTTTSNSSLTNPTFVDLSTDTPITSWVDYHHADKKKLQVFLNYSSPAASKPQNPVLSVDLDLYECFKDSLYVGFSGSTLGSTELIQLMSWSLEFESNLYPLINGSSSPSSVAVEGIPVSSNSTKGSNNRGKRFLFGLCVAFAGPAFFCVMLVVLGYVSFLKWRGLRNKKGFGTVGCCPKEFGYKEVKLATRGFHASRVIGKGSFGTVYKALFESSGTIAAVKRSRQYDGKTEFLAELSIIASLRHKNLVQLLGWCVEKGELLLVYEYMPNGSLDKVLYQECEGGNTNHVLSWVHRVNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDGNMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGMANEKSDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSQGRIIEAADRRLNGEFKEGEMKRLLLLGLSCANPDSAQRPSMRRVLQILNNEGGVSLVVPKEKPTLTFSSGLPLSLEDIVSDAEEDLNSGQVVCEIKID 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01849 652 Gene3D Phosphorylase Kinase; domain 1 315 404 - -
Phco11g01849 652 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Phco11g01849 652 SUPERFAMILY Protein kinase-like (PK-like) 315 612 IPR011009 -
Phco11g01849 652 Gene3D Transferase(Phosphotransferase) domain 1 405 608 - -
Phco11g01849 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Phco11g01849 652 Pfam Protein kinase domain 330 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01849 652 PANTHER - 51 604 - -
Phco11g01849 652 ProSiteProfiles Protein kinase domain profile. 330 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01849 652 Gene3D - 125 271 - -
Phco11g01849 652 FunFam L-type lectin-domain containing receptor kinase VIII.1 405 621 - -
Phco11g01849 652 CDD STKc_IRAK 336 604 - -
Phco11g01849 652 Gene3D - 33 124 - -
Phco11g01849 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 231 IPR013320 -
Phco11g01849 652 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01849 Phco-Chr11 14849032 14850990 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco11g01849 Pkinase 3.9e-49 CL0016