Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01825 ATGAAAATGGTGCTGGGAGGAGCTGAGAAACCTCCGGATTCCCTTGGTGTATACATATATGCTTTGAAAGCCTTAGATAATCTGCAATTACTAAAAATGGTACCAAAATTACCAAGGTCTTTGCCAATGGATGCTAAGTCGGCTGTAGAATTAATGGAGTCTTCCAACGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGGCTAGCATAGAACAACCAACAACCTCGGAAACTGACATGTATGAACAACCTTTTGTCATAGGTGTTGCTGGGGGTGCAGCATCTGGCAAGACAGCAGTTTGCGATATGATTATTCAACAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCCTTTTACAATAACTTTTCTGAGGAGGAACTTACACGAGTACAGGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGCTTCGAGTTATGGACAAGTTGAAGCATGGTGAAGCAGTAGATATTCCAAAGTATGATTTTAAGACTTACAAAAGTGATGTGTTAAGAAGGGTGAACCCTTCAGATGTCATAATTTTAGAAGGCATCCTTGTTTTCCATGATCAGCGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGATTGGCAAGAAGGATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAGCAGTTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTCATTCTTCCAACGAAGAAGTATGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATCCGCACAAAGCTAGGTCAGCATGACCTGTGTAAAATATATCCGAATTTATATGTTATTCAATCAACTTTTCAGATACGGGGTATGCATACGCTGATACGTGATGCTCAAACAACGAAGCATGATTTTGTATTTTACTCTGACCGTTTGATTCGATTGGTTGTTGAACATGGTTTGGGGCATCTGCCATTTACAGAAAAACAAGTACTCACCCCCACTGGTTCTGTATACACTGGTGTTGATTTTTGTAAAAGATTGTGTGGTGTCTCTGTTATCAGAAGTGGGGAGAGCATGGAGAATGCTTTGAGAGCATGCTGCAAAGGTATCAAGATTGGGAAAATTCTAATTCACAGAGAAGGTGACAATGGGCAGCAGCTAATATATGAAAAGTTGCCAAATGATATCTCAGACAGGCATGTGTTACTCTTGGACCCTATACTTGGCACAGGTAATTCTGCTGTTCAAGCAATTTCTTTACTCATAAGGAAAGGTGTACCTGAATCCAACATTATATTTCTTAATCTCATATCTGCACCTAAAGGGGTGCATGTTGTATGCAAAAGTTTTCCAAGAATAAAGATAGTAACATCTGAGATTGAAATCGGTTTGAATGAAGATTTTCGTGTTATACCCGGCATGGGTGAGTTCGGAGACAGGTACTTTGGAACAGATGATGATGATGAACAAATGGTGGTTTCTTCACAGGAGTTATAG 1563 0.3954 MKMVLGGAEKPPDSLGVYIYALKALDNLQLLKMVPKLPRSLPMDAKSAVELMESSNEVHFSGFHMDGFEQRKASIEQPTTSETDMYEQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYNNFSEEELTRVQDYNFDHPDAFDTEQLLRVMDKLKHGEAVDIPKYDFKTYKSDVLRRVNPSDVIILEGILVFHDQRVRELMNMKIFVDTDADVRLARRIRRDTNEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVLTPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDEQMVVSSQEL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01825 520 Pfam Uracil phosphoribosyltransferase 305 506 - -
Phco11g01825 520 CDD PRTases_typeI 364 479 IPR000836 -
Phco11g01825 520 FunFam Uridine kinase 86 290 - -
Phco11g01825 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 280 IPR027417 -
Phco11g01825 520 FunFam Uridine kinase 291 506 - -
Phco11g01825 520 Gene3D - 291 506 IPR029057 -
Phco11g01825 520 PANTHER URIDINE KINASE 74 416 - -
Phco11g01825 520 Gene3D - 86 290 IPR027417 -
Phco11g01825 520 PRINTS Uridine kinase signature 164 179 - -
Phco11g01825 520 PRINTS Uridine kinase signature 119 130 - -
Phco11g01825 520 PRINTS Uridine kinase signature 219 229 - -
Phco11g01825 520 PRINTS Uridine kinase signature 89 106 - -
Phco11g01825 520 PRINTS Uridine kinase signature 233 244 - -
Phco11g01825 520 PRINTS Uridine kinase signature 255 268 - -
Phco11g01825 520 SUPERFAMILY PRTase-like 290 507 IPR029057 -
Phco11g01825 520 NCBIfam uridine kinase 88 287 IPR000764 -
Phco11g01825 520 CDD UMPK 91 287 IPR000764 -
Phco11g01825 520 Pfam Phosphoribulokinase / Uridine kinase family 91 275 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01825 Phco-Chr11 14585240 14591285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01825 11 14585240 14591285 Phco3g00122 3 785644 792916 PCT