Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01821 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCTGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTTCCAGAAGTATCCAATCTTACAAGAGACAATCCTCCGATTGCATCTTTCATCATTCGGGTTGTAAGTTCTGTTGGAGATCGCAGGGCCATCGCACACCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAAGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATTATTGACGTTGAGTTTCTAGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCACATGCCATAGAGTCTCTTGGTAAAATGCTAACAGAAGGAATCCACACTGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCACAGAGCTGTTCTTGCTGCTAGATCACCTGTATTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCCACCATAAACATCTCCGATATGTCACTTGATTCATGCCAGGCTTTTCTCAACTATCTTTATGGAATCATCAAACATCAAGACTTTCTGATTCATAGGTTGGCCCTTCTTCATGCAGCCGACAAGTATGACATATCTGATCTGAGAGATGCATGCCATGAGAGTCTTCTTGAAGACATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCAGTTAATTAAACTGAAGATGAGTTGCCTCCGGTATCTTGTGAAGTTTGGCAAAATATATGAAATTCGGGATGATTTCAATACCTTCTTGCATAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTTTAGATGCTTGGAAAGGATTCTGA 987 0.4093 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEVSNLTRDNPPIASFIIRVVSSVGDRRAIAHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNAHAIESLGKMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLDSCQAFLNYLYGIIKHQDFLIHRLALLHAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLIKLKMSCLRYLVKFGKIYEIRDDFNTFLHNADRDLIAEVFHEVLDAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01821 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Phco11g01821 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Phco11g01821 328 Pfam BTB/POZ domain 155 259 IPR000210 GO:0005515
Phco11g01821 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Phco11g01821 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Phco11g01821 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Phco11g01821 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01821 Phco-Chr11 14563385 14565665 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phco11g01821 BTB 2.9e-22 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01821 11 14563385 14565665 Phco11g01821 11 14563385 14565665 ECH
Phco11g01821 11 14563385 14565665 Phco3g00312 3 2206328 2208768 PCT