Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01770 ATGGACCCGCACTGGAGCTCTCGCCAAACGTACCATCTACACCACCTTCACTTTTCCTCTATCCTTTCCTCTTTTTTTCTCATCTGGGTCGTGCTTATTTTTTCTGATAACTTTTCTGATAACGTTTTTCACTCTCTTTTTCTTGTAAGGTTTGAACGCTACCTTTATGATTATCTTGTCAAACGAAACATGCACCACACTGCTGAGATTTTTAGGAACGAGGCTGAACTTCCGCCAGATGCCGCTGCTGCTTCTTCGTGTGATGCTGTGGATGTCCCGGAAGGATTTTTGCTGGAGTGGTGGTCTCTCAACAGTGATTTTGACTTCTTCAAACAAATGCATGACAAACAGGGGTTGTTAGGAGGAAAGCAAGGTTGTAATGCTTTTCAAGAAGCAGGGTCTTCCATGAATGCAGAACCAATGTATCAATTGCCTAATAATTTTACTCCTGTTGGAGCACTCAACAGAGGAAGCAACTTGATGCCATCACATGTACCTTGTGGATGGCCAGTATTTTCCTCACCATCTGCACACCAAAAAGTAAGTGGTGAACTGCCACAATTTCTATTCCCATTTTCCCGTCAAAAGCCATGTGGTGAATTGCAACAGCTTTCATCTTCACATCATGAAGCGGTGATGACACCAGTAGCGAAAACAACAGAGGTTTCCAATGTCAATGCTCCAAAAGCAAAATCTGGATTTGTTGAGGAAACAGATCCGCTCATTGACAATTTGTTAAAATCATTCTGGATGTTTGAACATGGTCAACCAAGCCTATTTGACAAGCCGACAGTAGGAGAGAGCAGCAGAAATGCGGAGAATTTGGTGGAATGTGGAGATGGAAACACTGGTATGAATGCAATTGCTGGTTCAGCACCAGCATTGGAGGAGGATGATAGCATAAGTGACACAACTGATTGTTCCAGCAGTTTCCAAACTGATGCAGATGCTTCAACGGACTCTCAGTTGGAATCCAATGGAGAAACATAA 990 0.4313 MDPHWSSRQTYHLHHLHFSSILSSFFLIWVVLIFSDNFSDNVFHSLFLVRFERYLYDYLVKRNMHHTAEIFRNEAELPPDAAAASSCDAVDVPEGFLLEWWSLNSDFDFFKQMHDKQGLLGGKQGCNAFQEAGSSMNAEPMYQLPNNFTPVGALNRGSNLMPSHVPCGWPVFSSPSAHQKVSGELPQFLFPFSRQKPCGELQQLSSSHHEAVMTPVAKTTEVSNVNAPKAKSGFVEETDPLIDNLLKSFWMFEHGQPSLFDKPTVGESSRNAENLVECGDGNTGMNAIAGSAPALEEDDSISDTTDCSSSFQTDADASTDSQLESNGET 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01770 329 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 51 115 IPR044716 GO:0003714
Phco11g01770 329 Pfam LisH 55 75 IPR006594 GO:0005515
Phco11g01770 329 MobiDBLite consensus disorder prediction 292 329 - -
Phco11g01770 329 MobiDBLite consensus disorder prediction 304 329 - -
Phco11g01770 329 ProSiteProfiles LIS1 homology (LisH) motif profile. 53 79 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01770 Phco-Chr11 14005559 14016012 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Phco11g01770 LisH 3.5e-06 CL0561