Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01758 ATGGCATCATCCATTGCCACCTTCTTCAACAAGTTCCTCTATCTCCTCATCATCCTCTTGGTCCACCTTGGCTGCTTCATCTTCACCACCACCACCGTCGGAGGAAAAAAAGCACCGCCGTCAAAGAAACGCAAAATCTTACCTTCATCCCAACCCTCATCCCCTTCCCACCCAAAATTTAAAACCCACAAAGCCCTGTCCTCTTCTTGGCATTTCATCAAACACCTCCTTTCCACCAAGTCTTGCAAAACCCCCAAAACTGTCACCGCCCAATCCTCCCCTCAATCCACCGCCACCGCCTCCACAACCACCGTCTCCGCCGCTGCAGCGCGCTCCCTCGTTTCACTAACACAAGCCGACCCGGACAGAAAACCACCCGGGTCGTGTCCCGAGTCCGACATCTCCGCCGACACCAACCTCTTCTTCCCTCTCCGCAACGACATCTTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAACCCCACCTCTTGGAAACCCACCAAACCCTCAAGCACGCGGTTTCGGACCTATCCGGATCCGACCCGGGTCACAACATCGTCCAGATAATCTTCAAATCGGGTTGGCCCGAATCCAAACCCTCCCCCACCATAACCCGCATCCTCAAGATCCACAACAGCCCGAAGATCCTCGCGAAGTTCGAGGAGTACCGCGAGGTTGTCAAGTCTAAAGCGGCGCGTCACGGAGCCCTCACGCGCCGCCGAGACGAGCGCTGCATCGCCGACGGCAACGAGCTCATGCGCTTCCACTGCTCCACGTTCCTATGCGACTTGGGACACAGTGGGGATTCCTCAATTTGTTCGCAGCAATTTTGTAATATATGTGGAATTATTAAGTCGGGGTTTTCCCCGAAACTCGATGGAATTGCCACGCTGTCCACCAGCTGGCGGGCACACGTGGCTATCCCGGATGACGTGGAACGAGAATTCCGCTTCATGAATGTCAAACGGGCCATGCTCGTTTGTAGGGTCATTGCGGGTCGGGTTGGATCCGATTCAGACGATCCCGAAAAAGCTGATGGAGGTTTTGATTCGGTAATGGCGAGGCCAGAGACTGGGGTTTATACCCGGCTCGATGAGGAGGAGTTGTTGGTGTTTAATCCTAGGGCTGTTCTTCCTTGCTTTGTGATTGTGTATAGTGTCTGA 1164 0.5473 MASSIATFFNKFLYLLIILLVHLGCFIFTTTTVGGKKAPPSKKRKILPSSQPSSPSHPKFKTHKALSSSWHFIKHLLSTKSCKTPKTVTAQSSPQSTATASTTTVSAAAARSLVSLTQADPDRKPPGSCPESDISADTNLFFPLRNDIFPCTACGEIFQKPHLLETHQTLKHAVSDLSGSDPGHNIVQIIFKSGWPESKPSPTITRILKIHNSPKILAKFEEYREVVKSKAARHGALTRRRDERCIADGNELMRFHCSTFLCDLGHSGDSSICSQQFCNICGIIKSGFSPKLDGIATLSTSWRAHVAIPDDVEREFRFMNVKRAMLVCRVIAGRVGSDSDDPEKADGGFDSVMARPETGVYTRLDEEELLVFNPRAVLPCFVIVYSV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01758 387 ProSitePatterns Zinc finger C2H2 type domain signature. 151 172 IPR013087 -
Phco11g01758 387 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 173 IPR013087 -
Phco11g01758 387 SUPERFAMILY ADP-ribosylation 176 386 - -
Phco11g01758 387 MobiDBLite consensus disorder prediction 46 61 - -
Phco11g01758 387 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 69 385 - -
Phco11g01758 387 Gene3D - 172 386 - -
Phco11g01758 387 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01758 Phco-Chr11 13854052 13855215 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco11g01758 None None None