Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01739 ATGAAGAAAACAACAGGCCCCAGTTTGCATCAATCTGATAAAAGAAAAAGGAATGTTGGTGTCCAAGAGAGAGGTGCAGGAAATGGCACACAGAGTCGCAGTGTTGAGAACCATACTTTTCTGACATATATCAAGAATTTTTTTTCATCTTTTCTATCTGGGAAAAGAAAATCTGCCTCAGAAGCCCCCCAAAGTGATGACAGAAAGAGTACACACAAAGTTGGAGGGGTATCGTCTTCCACAGATATATCGTCTGATAGTTCTAGGAGTTCATCAAAATTGGTATTATCTCAATCCTCTCCATCATCTGGCACTTCAAGTAGTCACCTTGGAATTGGGAACTTCACCTTTGAGGAAATTTACAAGGCAACAGCTAAGTTCTCTCGAGACAATAAGATTGGGGAAGGCGCGTTTGGTACAGTGTATAAGGGAAGGCTTTACGATGGATCCGTCGTGGCTGTGAAGCGTGCCAAGAAGGATTTACAGAACAAGAACATAGCTGAGTTCAAGAATGAAATAAACACCTTGTCAAATATTGAGCACAGGAACCTTGTAAGGTGGCGTGGGTATTTGGAGCATGGGGATGAAAAGATTATTGTTGTTGAATATGTTAGTAATGGAACTCTTCGAGAACATTTAGATGGTATTCGGGGAAATGGACTAGAAATTGGTGAGCGTCTGGACATAGCCATTGATGTAGCTCATGGAATTACTTACCTTCACATGTACACAGATCATCCAATTATTCATAGGGACATCAAAGCATCAAATATCTTAATCACTGATAAACTAAGGGCTAAAGTAGCAGACTTTGGTTTTGCTCGGTTGGGTGCAGAAGATCCTGCTGCAACCCATATTTCAACTCAAATCAAAGGAACAGCTGGCTACATAGATCCTGATTACATGCGAACGCAACATCTATCTGAAAAGAGTGATGTCTATTCTTTTGGTGTGTTGCTTGTGGAAATGATGACAGGACGATATCCAGTTGAACCAAAGAGACCTCTTAGTGAGAGAGTTACAATTAAATGGGCAATGCAGATGTTGAAACAAGGAGAAATTGTGATTGCCATGGATCCAAGACTAAAGAGAAATCCAGCCTCAAACAAAGCAGTACAAAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCAGTGAGGCGATCACGGCCATCTATGCAGAGTTGTGTAGAGGTTCTGTGGGAAATCCGCAAAGATTTTACTGATAGAGCATCTTCTCATACTCATAGTGGTTCTCATCATTCTTCAAATTTCCCTCAAAGAGATGGCAGGAAGAATAGGCATAAGACATATGGTATTGAAGATGGTAAAGGCTATAAATTTGTATCTGCATAA 1356 0.4078 MKKTTGPSLHQSDKRKRNVGVQERGAGNGTQSRSVENHTFLTYIKNFFSSFLSGKRKSASEAPQSDDRKSTHKVGGVSSSTDISSDSSRSSSKLVLSQSSPSSGTSSSHLGIGNFTFEEIYKATAKFSRDNKIGEGAFGTVYKGRLYDGSVVAVKRAKKDLQNKNIAEFKNEINTLSNIEHRNLVRWRGYLEHGDEKIIVVEYVSNGTLREHLDGIRGNGLEIGERLDIAIDVAHGITYLHMYTDHPIIHRDIKASNILITDKLRAKVADFGFARLGAEDPAATHISTQIKGTAGYIDPDYMRTQHLSEKSDVYSFGVLLVEMMTGRYPVEPKRPLSERVTIKWAMQMLKQGEIVIAMDPRLKRNPASNKAVQKVLKLAFQCLAPVRRSRPSMQSCVEVLWEIRKDFTDRASSHTHSGSHHSSNFPQRDGRKNRHKTYGIEDGKGYKFVSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01739 451 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Phco11g01739 451 Gene3D Phosphorylase Kinase; domain 1 87 203 - -
Phco11g01739 451 ProSiteProfiles Protein kinase domain profile. 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01739 451 MobiDBLite consensus disorder prediction 58 108 - -
Phco11g01739 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phco11g01739 451 MobiDBLite consensus disorder prediction 1 21 - -
Phco11g01739 451 Gene3D Transferase(Phosphotransferase) domain 1 204 424 - -
Phco11g01739 451 Pfam Protein tyrosine and serine/threonine kinase 130 400 IPR001245 GO:0004672|GO:0006468
Phco11g01739 451 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 204 414 - -
Phco11g01739 451 SUPERFAMILY Protein kinase-like (PK-like) 101 403 IPR011009 -
Phco11g01739 451 PANTHER OS01G0750732 PROTEIN 55 416 - -
Phco11g01739 451 Coils Coil 159 179 - -
Phco11g01739 451 MobiDBLite consensus disorder prediction 411 439 - -
Phco11g01739 451 MobiDBLite consensus disorder prediction 425 439 - -
Phco11g01739 451 MobiDBLite consensus disorder prediction 74 108 - -
Phco11g01739 451 SMART serkin_6 127 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01739 451 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01739 Phco-Chr11 13674561 13677671 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Phco11g01739 PK_Tyr_Ser-Thr 8.7e-51 CL0016