Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01710 ATGGTTTCTACTTGGGTAAGAGGCAAGTGCATAGGTAAGGGCGCGTTTGGCACCATCAGCGTCGCGCTTCGAAAGCTTGAGGCTCAAACGCAAATTTTCGCGGTGAAGTCCGTGGATATTAAAACGGGTCTTCCGGGTCAGCTCGAAGCGTTGGAAAACGAGATTCGGATCCTCCAACGCATGTCCTCGCCGCACGTGGTAACCTTTCTCGGTGAAGACACCACGTCGGAGAAGCGGAACCTTCACATGGAGTATATGCCAGGTGGCACTCTCGCTGACCTGGACGCCGACGTGGAAGAGTATTTAGTGAGACAATACACGTGGTGCTTGGTGAGTGCTCTGAAGCACGTGCACGCAAACGGCGTCGTTCACTGCGACGTGAAGGGGAAAAACGTCCTTATCGGAGACGGAGCCAACGGCTGCAGCTGCAAGCTCGCCGACTTCGGATCGGCGATGGAGTTCGCCGGTGAAGGTCTCCCGGCGGCTTCGCCGCGCGGGAGTCCGTTGTGGATGGCGCCGGAAGTGATACGCCAGGAGTGTCAGGGTCCGGCGTCGGACGTTTGGTCGTTAGGTTGCACGGTGATCGAGATGCTTAGAGGAAAGCCGCCGTGGGAGGGGAACGCGGTCGACGCGCTCAGTCGAATTGGCTTCTCCGGCGAGGTACCGGGGTTTCCGCGCCGGTTATCGGAGCTCGGCCGGGATTTTCTAGAGAAGTGTTTGAGGTGGGAGCCGCGGCGGCGGTGGAGCTGCGATCAGCTTCTGGAGCATCCCTTTCTGTTACCGTGTGGTGTGATCGTGGAATCGTCGCCTCGGTGCGTTCTCGACCGAGTTGACTCGGAGTTCGCTGAGTTCGACGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAACAATGAGAACTGAAAATGAAAAATCGGCGAGGGATAGAATTGGAAATTTGGCTATGAGCGTAGGGGTAGACTGGGAAACGCAAGGATGGGTGATGGTGAGGGAATTGGCTTTGGATGCGGAACCGGTGGCGGGAGACAGTTCTGAGGACGTTAGAGAAGGGATGATTTTGGGGAATTTTGAGATTTTGAGGGTAGAACGGGGAATTCATGTTGGGACAAATTTGAAATGTGTAGGATTGGAAAAGAAAATGGAAAAATTTGGAATGTGGAGTTTGAGTGGGAGGCGTTGGTTGGTACAGTACAACCGGCTCAGCGAGTGTGAACTTGGGTGGGAAAATGTTGATAAGAAAAAAAGAATGATAATGAAAATAAAGATTTACAAGTTGTACCGTAAATTATTGGAATCACATTGTTTGTTTTTGAAGTATTTAAACATATATTTATGTTTTGGTGTTATTGGGTGGATTAATTTTGATGGTATTATGAGTAAAGTATATTTGTAA 1395 0.5075 MVSTWVRGKCIGKGAFGTISVALRKLEAQTQIFAVKSVDIKTGLPGQLEALENEIRILQRMSSPHVVTFLGEDTTSEKRNLHMEYMPGGTLADLDADVEEYLVRQYTWCLVSALKHVHANGVVHCDVKGKNVLIGDGANGCSCKLADFGSAMEFAGEGLPAASPRGSPLWMAPEVIRQECQGPASDVWSLGCTVIEMLRGKPPWEGNAVDALSRIGFSGEVPGFPRRLSELGRDFLEKCLRWEPRRRWSCDQLLEHPFLLPCGVIVESSPRCVLDRVDSEFAEFDEEDEEDEEEEEETMRTENEKSARDRIGNLAMSVGVDWETQGWVMVRELALDAEPVAGDSSEDVREGMILGNFEILRVERGIHVGTNLKCVGLEKKMEKFGMWSLSGRRWLVQYNRLSECELGWENVDKKKRMIMKIKIYKLYRKLLESHCLFLKYLNIYLCFGVIGWINFDGIMSKVYL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01710 464 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Phco11g01710 464 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01710 464 Coils Coil 284 304 - -
Phco11g01710 464 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01710 464 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Phco11g01710 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Phco11g01710 464 ProSitePatterns Protein kinases ATP-binding region signature. 11 36 IPR017441 GO:0005524
Phco11g01710 464 FunFam Serine threonine protein kinase putative 3 315 - -
Phco11g01710 464 MobiDBLite consensus disorder prediction 283 306 - -
Phco11g01710 464 CDD STKc_MAPKKK 5 259 - -
Phco11g01710 464 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01710 464 MobiDBLite consensus disorder prediction 283 299 - -
Phco11g01710 464 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01710 Phco-Chr11 13325882 13327276 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco11g01710 Pkinase 2.9e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01710 11 13325882 13327276 Phco11g01710 11 13325882 13327276 ECH
Phco11g01710 11 13325882 13327276 Phco3g00348 3 2494066 2495436 PCT