Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01689 ATGCACCAAACGGTGAACAAATCCACGGATGGAAGAACGGTGGAGGTTCATGACTTGGTTGAAGCTATTACGCGTGCTGGTGGCGTTGGTGTCTCTGCTATTCTCGTTCACCATGGAACCTGTTCGGTGTTCCACTCTCAACTCAGAAGGAACTTGAAAGATCTATGTCTCCACGGAACACTAGCACCTGAAATTGGAAAGCTAGTTCACATAAAATCAATTATTTTGCGCAACAACCATTTCCATGGAGAAATCCCTAAGGAAATACTACAATTAGAGGAGCTAGAAATTCTTGACTTAGGATATAACAACTTCAGTGGACCATTTCCATCTGAAGAACTTGGCAGCAATCCATCCTTGATTACCCTTTTATTGGACAACAATGACCATCTTGCTTACTTAACTCCGGAATTGTATAAGCTCGAGACATTTTCTACTGGTGCTACCTCTAGAGAAGCATGTGTTACCAAATCAAATATCAGGCAAATTGGCCAACATGGGGACACAGCACAAATAAGGAAACTTCTCCAAGCAGCAAATGGTGCTGAGAGGGGTGATGATGACAAAGACACTCTTTCACCATCACCTTTGCCCTCTACACTATCACCTCTTTCAGAGCCTTTCTCACCATCACCATCACCATCAGAGAGTCCCTCAGATTCTCCAACATCTTCAGAACTATCCCCCTCACCATCTCCATCTCTCTCCATTTTCTTTTTCTCTCTTTCACCCTCACCTTCACATGTGCCAGCACCAACTCCAGAGATATCACCTCCAGCAAATCCACCTATGCCGTCCAATTGGGTTTCAATGCCTTCTCCTCCTTCTCCTGCCTCATCTGCAAACACATCAAACACAAACCAGCACAATGTGATTATATGGTCCACAGTTGGGGGCTTCTCCTTGATTTTGGTGTCAGCCATTGTTTTTCTTTTCTTCAGAAGTAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCATTTTTAACAGGTGTTCCAAGTCTGAAAAGAACAGAACTCGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTATTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGCTTTATCCCAAAACTGGTCCAAAAAACTGGAAACTCAATTCCGAAAGAAGGTATGCAGGCAACAAAGCGATGTTGTCAAGAATTAACCACAAAAATTTTGTGAATCTAATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATTTGAGCATCTACACATTAGAGAAGCAGAAAGACTAGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTACTGTCTGGAGCACATGCATCAGCTGACACCACCCATTGCCTATAAAAATATACTATCTTCCTCTATATATCTAACTGAAGATTATGCTGCTAAATTATCAGACCTCAGTTTCTGGACTGACATAGTCTCTACAAAGAAGAGTTCTGAAGCATCACAGCTCTTAGAAACTGCTCCAGAATATATCAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGAAGATTGGGCAGCAGAGTATCTAAAGGGACAACCCTTGAGAGACGTGGTGGATTCAAACCTGAACCCTCTGCAAGCAAATGAAATCGAGAAATGGGAAGAAGTGATTAACAGCTGTGTAGATCCTGATCCAGAAAAACGACCAACTATGAGGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGATGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTGAATCCATAA 1962 0.4235 MHQTVNKSTDGRTVEVHDLVEAITRAGGVGVSAILVHHGTCSVFHSQLRRNLKDLCLHGTLAPEIGKLVHIKSIILRNNHFHGEIPKEILQLEELEILDLGYNNFSGPFPSEELGSNPSLITLLLDNNDHLAYLTPELYKLETFSTGATSREACVTKSNIRQIGQHGDTAQIRKLLQAANGAERGDDDKDTLSPSPLPSTLSPLSEPFSPSPSPSESPSDSPTSSELSPSPSPSLSIFFFSLSPSPSHVPAPTPEISPPANPPMPSNWVSMPSPPSPASSANTSNTNQHNVIIWSTVGGFSLILVSAIVFLFFRSNKVVTVKPWATGLSGQLQKAFLTGVPSLKRTELEVACEYFSNIIGSLPDGTIYKGTLSSGVEIAVVSSAVLYPKTGPKNWKLNSERRYAGNKAMLSRINHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAERLDWGMRIRIAMGIAYCLEHMHQLTPPIAYKNILSSSIYLTEDYAAKLSDLSFWTDIVSTKKSSEASQLLETAPEYIKANVYSFGVLLFELITGRIPFAVENGLFEDWAAEYLKGQPLRDVVDSNLNPLQANEIEKWEEVINSCVDPDPEKRPTMREVTSKLKEITTIGPDGATPKASPLWWAEIEIMSTDLSSDVNP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01689 653 MobiDBLite consensus disorder prediction 180 232 - -
Phco11g01689 653 MobiDBLite consensus disorder prediction 249 272 - -
Phco11g01689 653 MobiDBLite consensus disorder prediction 218 232 - -
Phco11g01689 653 SUPERFAMILY L domain-like 51 144 - -
Phco11g01689 653 Gene3D Ribonuclease Inhibitor 30 152 IPR032675 -
Phco11g01689 653 ProSiteProfiles Protein kinase domain profile. 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01689 653 SUPERFAMILY Protein kinase-like (PK-like) 339 617 IPR011009 -
Phco11g01689 653 MobiDBLite consensus disorder prediction 249 283 - -
Phco11g01689 653 Gene3D Transferase(Phosphotransferase) domain 1 440 625 - -
Phco11g01689 653 Pfam Protein tyrosine and serine/threonine kinase 359 617 IPR001245 GO:0004672|GO:0006468
Phco11g01689 653 Gene3D Phosphorylase Kinase; domain 1 328 439 - -
Phco11g01689 653 PANTHER PROTEIN MALE DISCOVERER 2 40 645 - -
Phco11g01689 653 MobiDBLite consensus disorder prediction 200 217 - -
Phco11g01689 653 FunFam Inactive receptor-like serine/threonine-protein kinase 327 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01689 Phco-Chr11 13048604 13053423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco11g01689 PK_Tyr_Ser-Thr 1.7e-23 CL0016