Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01652 ATGGAGACTGAAGCTGACTCAAGAGATAGTTCTCTCATTCTGCTCAAACAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCCGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAGCTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTTTGCTGTGGATCATGTGTTGCACACTTTAACATTTGAATATGTTACTGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTCGGGTCACATGGAACTGATAAAGAGTGGCTGGACAATATTGCATCCCAAATTGGTGACGCAATTGGGAAGTTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAACATGTTATTGAAGAGTGATACCAAGCAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTTCCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGATCTCTTATCTCAATGCATTCATCATGTGGGAATGTGATGGATCAAATTCTTGCTGCATACAGGAAGTCATCAAAACAGTGGTCATCCACATTAAACAAGCTAGCACAAGTGCGACAAAGAGGGCGGAAGAGGACCATGGTTGGATGA 681 0.4214 METEADSRDSSLILLKQGAEARVFESSFVGRKSVVKERFSKKYRHPALDSKLTLKRLNAEARCMTKARRLGVCTPVLFAVDHVLHTLTFEYVTGPSVKDVFLEFGSHGTDKEWLDNIASQIGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERSLISMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01652 226 Gene3D Transferase(Phosphotransferase) domain 1 108 223 - -
Phco11g01652 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01652 226 FunFam TP53-regulating kinase isoform X1 20 92 - -
Phco11g01652 226 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 226 IPR022495 GO:0004674
Phco11g01652 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Phco11g01652 226 Pfam Protein kinase domain 40 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01652 226 FunFam Protein kinase superfamily protein 107 223 - -
Phco11g01652 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Phco11g01652 226 SUPERFAMILY Protein kinase-like (PK-like) 14 175 IPR011009 -
Phco11g01652 226 NCBIfam KEOPS complex kinase/ATPase Bud32 18 220 IPR022495 GO:0004674
Phco11g01652 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01652 Phco-Chr11 12694483 12696857 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco11g01652 Pkinase 3.8e-11 CL0016