Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01634 ATGCCGGAGATCGACCAGGTGGCAGTGGAGGACACTGGCTTGTTCGGAAAGTACGAGCTGGGGCGTGTTATCGGGTGCGGTGCCTTCGCGAAGGTGCACTACGCGCGCAACGTGCAGTCGGGGCAGAGCGTTGCCGTGAAAATCATCAACAAGAAGAAGCTCAACGGGACGGGCCTCGCCGGAAACGTGAAGCGTGAAATCACGATCATGAGCAAGCTCCACCACCCCAACATTGTGCGTCTCCACGAGGTTCTCGCCACCAAAACCAAAATCTTCTTCGTCATGGACTTCGTCCGCGGCGGCGAGCTCTTCGGGAAGATCTCGAAGGGTCGCTTCGGGGAGGATCTCAGCCGGAGGTACTTCCACCAGCTCATCTCCGCCGTCAGCTACTGCCACTCGCACGGCATCTTCCACCGCGACCTCAAACCGGAGAATCTCCTCCTTGACGAGAACGGCGATTTAAGGGTCACCGATTTCGGGTTGAGTGCCGTCACGGACCAGATCCGACCCGACGGGTTGCTCCACACGCTTTGCGGAACCCCTGCCTACGTGGCACCCGAGATTTTAAGCAAAAAAGGTTATGATGGCGCCAAGGTTGATGTTTGGTCTTGCGGGGTTGTTTTATTCGTCCTCGCCGCGGGTTACTTACCGTTTAATGATCCGAATTTGATGGTAATGTATAAGAAGATTTACAAGGGTGAGTTCCGGTGCCCGCGGTGGATGTCGCCGGATCTCCGGCGCTTTTTGGCGAAGCTTCTAGACACCAACCCAGAAAAGAGGATCACATTGGACGGCATGCTCCGTGACCCGTGGTTCCAAAAAGGGTACAAAGAGATAAAATTTCAGGAGGAGGATTACATGTTCAGGTCGGATATGGGGCCGAAAGACGAGCGAATCATTAATTTGAACGCTTTTGACCTAATATCTTTCTCTTCGGGTTTGAATTTGTCGGGGCTGTTCGGGGATGCCGGCGAGGGGGAGCGGTTGGTGACGCGGGAGTCGCCGGAGAATGTGCTGGAGATGGCGCAGGCGGCGGGGGCGGCTGTGGATATGGAGGTGCAGTGTAAGAAGGAGTGCGGGGTGAAGTTAGAAGGGCTCAGTGGGCAGTTTGGGTTTGAGGTGGAGGTTTACCGGCTCACGGCGGATCTCACGGTTGTGGAAGTCCGGAATAGGGGCGGCGACGCCGTGCCGTTTAATAGGGTGTGGGAGGAGAAGTTGAAGCCTTCGTTGCTCGGAGGTGCGACGACGTCGTATAACAGCGAAGAGCAAAATCAACAACAACAACCTGAGTCGCAGGAGGTTGCCGGTGACTGA 1314 0.5594 MPEIDQVAVEDTGLFGKYELGRVIGCGAFAKVHYARNVQSGQSVAVKIINKKKLNGTGLAGNVKREITIMSKLHHPNIVRLHEVLATKTKIFFVMDFVRGGELFGKISKGRFGEDLSRRYFHQLISAVSYCHSHGIFHRDLKPENLLLDENGDLRVTDFGLSAVTDQIRPDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPDLRRFLAKLLDTNPEKRITLDGMLRDPWFQKGYKEIKFQEEDYMFRSDMGPKDERIINLNAFDLISFSSGLNLSGLFGDAGEGERLVTRESPENVLEMAQAAGAAVDMEVQCKKECGVKLEGLSGQFGFEVEVYRLTADLTVVEVRNRGGDAVPFNRVWEEKLKPSLLGGATTSYNSEEQNQQQQPESQEVAGD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01634 437 FunFam Non-specific serine/threonine protein kinase 8 298 - -
Phco11g01634 437 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Phco11g01634 437 Gene3D Kinase associated domain 1, KA1 303 412 - -
Phco11g01634 437 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01634 437 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 391 - -
Phco11g01634 437 Pfam NAF domain 301 354 IPR004041 GO:0007165
Phco11g01634 437 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01634 437 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Phco11g01634 437 SUPERFAMILY Protein kinase-like (PK-like) 15 284 IPR011009 -
Phco11g01634 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Phco11g01634 437 Gene3D Transferase(Phosphotransferase) domain 1 9 302 - -
Phco11g01634 437 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Phco11g01634 437 CDD CIPK_C 303 410 - -
Phco11g01634 437 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01634 437 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01634 Phco-Chr11 12565196 12567294 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco11g01634 Pkinase 1.3e-69 CL0016