Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01555 ATGCTGCAACTTAAGCTACTGGTCTTAACCTTGATATGGTGGAGTTATAATAATATTCTTGCATATGGTGCAGTTGAAAATTCCCAGACAAATCTACTGAACAAGGGGTGCAGTGCATACAATGCATCCAACTTGCGTAGCTTCTTTGCCAATATGAATGAAACGTTTGAAAGCCTGAGAGCACAAATTAGCAATGATAAGAACAGGCACTTTGCCATAGAAGATAAAGCCAGGGGAGAGGTGCTCACATATGCTATGTTTCAATGCAGAAACTATCTCTCCAAAACTGAATGTCTTACTTGCTTCAACACTGCCACCTCCCAAATCCGCAACTGCTCTGCTGCTAATGGCGCCAGAATCATATACGACTCCTGCTTCCTCAGGTATGAGAGCGACAGGTTCTACGATGAAACCAATGAACCTGGCGGTGGTGTATCATGTGGGAACACGAGTTCAACCGTCACTGGTTTTAGAGTAGCTGTACAACAAGTGTTAATGGAGCTCCAAGAAGCAACACCAAAAATTGAAGGTTTTTATGCAGCTACTAAGACACCGGTTGTTGGTGGTAGTGCAATATATGCTGTTTCACAGTGTGTTGAAACAGCCATAAAGACTACTTGTCTGAACTGCATGCAAGTTGCATTTAACAACTTACAACGTTGTCTTCCCAACACAGATGGAACAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACATCTTTCTTTGCTGATAATCAAACCATTGATATTGCTCCCTTTTTAAAACAAGGAGGTTCAAGGAAGAAGTGGGGTATTATAAGTGGTGTTGTTGTTGGAGCTGTTCTTCTCCTCCTTCTTTTGATTGCTTGGAGATGGTATAGAAAATCAAAGGGGGTTCACAGAGGTGACATATTAGGAGCAACTGAGTTGAAAGGTCCGGTTAAGTATAAGTATAATGATTTGAAAGCTGCAACAAAAGAGTTCAGTGCTGAAAACAAACTTGGAGAAGGAGGGTTTGGTGAAGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAAAAACTAGTTTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTAGACTTCTTGGTTGCTGCAGCAAAGGTCAAGAGAGAATCTTGGTTTATGAGTATATGGGAAATAGCAGTCTTGACAAATTCTTATTCGGTCACAGAAAGGGTTGCCTCAGTTGGAAACAACGCTATGATATAATTTTAGGCACAGCAAGGGGACTGGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATCAAGACTGCTAATATCCTGTTAAATGATGATCTTCAGCCAAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCAGAGGACCGTTCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGCCTATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCTTAGAAATAATAAGTGGTCAAAAGAGTACCGATGTGAAGGTTGATGAGGATGACAGTGAATATCTTCTTCAACGATCATGGAAACTGTACGAGAGAGGCTCTCACCTGGAGCTGTTGGAAGAGGCCATAGACCCTAATGAATATGATGCGGAAGAAGTGAAGAGAATAATAGAAATTGCTTTATTATGCACTCAGGCAACAGCTGCAACTAGGCCAACAATGTCTGAAGTAGTAGTATTGCTCAAAAGCAAGAACTCAGTGGAGCACCTGCGACCAACTATGCCTGTGTTTGTTGGAACGAATGTGATGACTCGGGAAGGCAACTCTACTAGTTCATCTAATGCTACTGCTTCCATTTCTATTGCATCAGCTCGATGA 1920 0.4141 MLQLKLLVLTLIWWSYNNILAYGAVENSQTNLLNKGCSAYNASNLRSFFANMNETFESLRAQISNDKNRHFAIEDKARGEVLTYAMFQCRNYLSKTECLTCFNTATSQIRNCSAANGARIIYDSCFLRYESDRFYDETNEPGGGVSCGNTSSTVTGFRVAVQQVLMELQEATPKIEGFYAATKTPVVGGSAIYAVSQCVETAIKTTCLNCMQVAFNNLQRCLPNTDGTAYDAGCFMRYSTTSFFADNQTIDIAPFLKQGGSRKKWGIISGVVVGAVLLLLLLIAWRWYRKSKGVHRGDILGATELKGPVKYKYNDLKAATKEFSAENKLGEGGFGEVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMGNSSLDKFLFGHRKGCLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTANILLNDDLQPKIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAMHGLLSEKADTYSYGIVVLEIISGQKSTDVKVDEDDSEYLLQRSWKLYERGSHLELLEEAIDPNEYDAEEVKRIIEIALLCTQATAATRPTMSEVVVLLKSKNSVEHLRPTMPVFVGTNVMTREGNSTSSSNATASISIASAR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01555 639 Pfam Salt stress response/antifungal 41 131 IPR002902 -
Phco11g01555 639 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Phco11g01555 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Phco11g01555 639 SMART serkin_6 323 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01555 639 Gene3D - 28 134 IPR038408 -
Phco11g01555 639 Gene3D - 145 243 IPR038408 -
Phco11g01555 639 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Phco11g01555 639 Gene3D Transferase(Phosphotransferase) domain 1 400 607 - -
Phco11g01555 639 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Phco11g01555 639 FunFam Cysteine-rich receptor-like protein kinase 2 289 399 - -
Phco11g01555 639 Gene3D Phosphorylase Kinase; domain 1 293 399 - -
Phco11g01555 639 CDD STKc_IRAK 329 596 - -
Phco11g01555 639 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Phco11g01555 639 MobiDBLite consensus disorder prediction 619 639 - -
Phco11g01555 639 FunFam Cysteine-rich receptor-like protein kinase 2 142 243 - -
Phco11g01555 639 SUPERFAMILY Protein kinase-like (PK-like) 311 621 IPR011009 -
Phco11g01555 639 FunFam Cysteine-rich receptor-like protein kinase 2 400 603 - -
Phco11g01555 639 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Phco11g01555 639 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 625 - -
Phco11g01555 639 ProSiteProfiles Protein kinase domain profile. 323 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01555 639 Pfam Protein tyrosine and serine/threonine kinase 325 593 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01555 Phco-Chr11 11881802 11885277 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco11g01555 PK_Tyr_Ser-Thr 1.9e-50 CL0016