Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01523 ATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTAGGTTCCACCCCACAGATGAAGAACTTGTTTCTTATTACCTCAGAAGAAAGATAAATGGTCGTAAGATTGAACTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTTAGCCCTCGAGATAGGAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAATCTGGGTACTGGAAAGCCACAGGGAAAGACCGTAAGGTGAATTCTCAGAATTGTGCAATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACATGGTTGTCGCACAGGTTGGGTTATGCACGAGTACCGTCTTGATGAGACACAGTGTGAAACCAACACAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGAGATCAACACTATGTTAATGTCAGCACCAGCCATGCAAATCAGATAATTGCAAGTGATCAATCATCAAGCATTAACGAGCTATACTCTGAAGGTAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTTATGTCAATGGATACCTGCCCATCCCCAAACATAAATGGAACTACTTTCAATATCAATGGTGGAAGAAGGGATAATGAGACAACATGGTCACATTTCTTATCAGAAGACTTGCTTAATCTTCCAACAACATCCACTTCTTCATTTCCCAATTATGGATCCATGACCTATCCTCCATCAAAGGTGGATGTAGCACTGGAGTGTGCAAGGATGCAGCATAGGTTTAACATGCCTCCATTGCAGATGCAGGACTTGGACTTCCCTCAAGTTGGCATTTCCAAGCTGAAGATGACACAAGGCTCAAGTTCCATGAGTGGAAGCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCGCAGGAGTTAATAAATCAATCCAACTACTCATCACAAGCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAACTGACTTTACTTTTATGGTTGGTACCAATTACAATCATGTCAATGACATGAACACCATGGGATTTGTTGACAAAGCATGGGAAGACCAAAACACAAGATCAATTGAGATTGGAGATCTTGATGATGGATTCAAGACGGAGAGGATGATGGAGAATTTAAGATGGGTGGGAATGAACAGCAAAAATGTGGAAAAGAGCTTTATGGAAGAGCAGCAAAATATTGTTCCAATTGATGATATCTCAAACTTCCAAACTAATACGGAAGAAAACGAACTGAAAGTGGGATTTGAGAAACACAGTTGCAACAGAGAAATAACGGATACTGAGATTGATGATTTTTCAATGGGATTCATGAATGATGAAGACCCCAATGAGAACTTCCTAAATGAGGAAAACATTGACTATTCAAATTCTACAAACTATGATGTTGTTGAGGAAACAAAAACCAATCATGGAATGTTTGTCTCAACTCATCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCAGTAATGGCTGGCAATCAATGTATAGAGAAAGCAACAGTCAACAAAGGACCCTATTTCTTTAGAAAGTTTAAGGCCTGTGTGACAGGGAAGCTAATAAAGCCATCAAACACAGTAGCAAGTGTTCTTGAATTCATCTTTGCATTTTTGTTGATGCATTGTGTTTTTTTAAAGGAATTAGTGGAAGATTGGAAACCAGACCTTAAACGTCGTGGCTGTGTTTACACCATGAAGAGTATGGGAGAAGCAGCAGAGAGTGTGACTAGGAATGAACAAGAAAAGGTTTGGTTTGTTGGTATCAGATATGGGAAAGGATTTAGCATGGTCCTAAAGAAGATAAGCATATTCCTCACTATATCATTGGCTCTGTTTACCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2016 0.3978 MNMAPVSLPPGFRFHPTDEELVSYYLRRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQNCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNTGLQDAYALCRVFKKTAVIPPKVGDQHYVNVSTSHANQIIASDQSSSINELYSEGRGEVLESSNYFMSMDTCPSPNINGTTFNINGGRRDNETTWSHFLSEDLLNLPTTSTSSFPNYGSMTYPPSKVDVALECARMQHRFNMPPLQMQDLDFPQVGISKLKMTQGSSSMSGSRNETDILQEILSVAHASQELINQSNYSSQAFMNANENYAPHETDFTFMVGTNYNHVNDMNTMGFVDKAWEDQNTRSIEIGDLDDGFKTERMMENLRWVGMNSKNVEKSFMEEQQNIVPIDDISNFQTNTEENELKVGFEKHSCNREITDTEIDDFSMGFMNDEDPNENFLNEENIDYSNSTNYDVVEETKTNHGMFVSTHQVADTFFHQIAPSQTVKVQLNPVMAGNQCIEKATVNKGPYFFRKFKACVTGKLIKPSNTVASVLEFIFAFLLMHCVFLKELVEDWKPDLKRRGCVYTMKSMGEAAESVTRNEQEKVWFVGIRYGKGFSMVLKKISIFLTISLALFTMWANHIIVDS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01523 671 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Phco11g01523 671 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Phco11g01523 671 FunFam Nac domain-containing protein 86 17 161 - -
Phco11g01523 671 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phco11g01523 671 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 309 - -
Phco11g01523 671 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01523 Phco-Chr11 11592043 11596108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco11g01523 NAM 2e-40 No_clan