Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01404 ATGGGGTGTGTGATTAGCAGGGAGGCGTCGAAGGGGATAATCTCTGAGGTGAAGGAGGAGAAGGGTTTGGGTGGTCAGAGTAAGAGGAAGGTTGATGGAGTGTCTGGGAGCACGGGTGAGGTTGCGGTAGAGGTTCAGAATGGTGAGGAGAAAGAGAAGGAGAAGGGTGGTGGTGAAGAGGTGCAGCGGCCTCGGGGCGAAAGGAGGAGATCGAAGGCGAATCCGAGGCTGAGCAATCTGCCCAAACATTTGCGGGGGGAGCAGGTTGCTGCTGGATGGCCGCCGTGGCTCACTGCAGTGTGTGGGGAAGCACTCAGTGGCTGGATTCCGCGAAAGGCAGACACCTTTGAGAAAATTGACAAGATCGGGCAAGGAACTTATAGTAATGTTTACAAAGCTAAAGACATAATGACGGGTAAAATTGTTGCCCTAAAGAAGGTTCGTTTTGACAATTTGGAACCTGAGAGCGTAAAATTCATGGCGAGAGAGATTCTTATTTTGAGAAGGTTGGACCATCCCAATGTTGTAAAGTTGCAAGGTTTAGTTACGTCAAGGATGTCCTGTAGTTTGTATTTGGTGTTCGATTACATGGATCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTGCTATCAGGACTTGAGCACTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGGTCAAATCTTCTTATTGACAATGAAGGAACACTTAAGATTGCCGACTTTGGACTGGCTTCTATTTTTGATCCAAACCATAAACATCCCATGACTAGTCGTGTAGTAACCCTTTGGTATCGACCTCCTGAGTTGCTCCTTGGTGCCACAGATTATAGCGTGGGTGTAGACCTCTGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGCTGGGAAACCAATCATGCCTGGTCGTACAGAGGTGGAACAACTGCACAAGATATACAAACTATGTGGTTCACCTTCCGATGAGTATTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCAAGAGAGCCATACAAGAGGCGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTGCTCTACCCCTCATTGATTCACTTCTTGCAATTGATCCCGTAGAACGGGAAACTGCCTCAGATGCTTTGAGAAGTGAGTTCTTTACAACAGAACCTTATGCTTGCGATCCTTCTAGTCTGCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGAAGGGATGATGAAATGAGGAGACTAAGAGCTGCTGGCAAAGCTCAGGTTGATGGTTCCAAGAAGCATCGGACTCGTGATCGTGGTACAAAAGCTTTTCCTGCCCCTGAAGCCAATGCTGAGCTTCAATCAAATATTGATAGAAGACGGCTAATCACTCATGCAAATGCCAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATCAAGATGGACAACTTGGTTTTCCTCTGGGTTCTTCACATCATATTGATCCAGATACTGTTCCAACTGATGTCTCTTTCACATCAACCTCTTATACCTATTCAAAGGAACCATTCCAAGCTTGGTCTGGTCCCATCGGTAATGCTGCTGACATTGGAGTGCCAAAGCGGAAGAAACACACTGCAGGTGATGCATTGGATTTATCAAAACCACAGAAAGATGCCCTCAAGGACAAGATTAAAGGAAAGAAAATCATAGCTTAG 1737 0.4583 MGCVISREASKGIISEVKEEKGLGGQSKRKVDGVSGSTGEVAVEVQNGEEKEKEKGGGEEVQRPRGERRRSKANPRLSNLPKHLRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDIMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMDHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGTLKIADFGLASIFDPNHKHPMTSRVVTLWYRPPELLLGATDYSVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRRIRETFKDFPPSALPLIDSLLAIDPVERETASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEMRRLRAAGKAQVDGSKKHRTRDRGTKAFPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDTVPTDVSFTSTSYTYSKEPFQAWSGPIGNAADIGVPKRKKHTAGDALDLSKPQKDALKDKIKGKKIIA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01404 578 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Phco11g01404 578 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
Phco11g01404 578 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01404 578 CDD STKc_CDK9_like 116 400 - -
Phco11g01404 578 MobiDBLite consensus disorder prediction 407 455 - -
Phco11g01404 578 MobiDBLite consensus disorder prediction 418 455 - -
Phco11g01404 578 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Phco11g01404 578 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01404 578 MobiDBLite consensus disorder prediction 45 74 - -
Phco11g01404 578 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Phco11g01404 578 MobiDBLite consensus disorder prediction 16 83 - -
Phco11g01404 578 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01404 578 SUPERFAMILY Protein kinase-like (PK-like) 111 407 IPR011009 -
Phco11g01404 578 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Phco11g01404 578 Gene3D Transferase(Phosphotransferase) domain 1 199 441 - -
Phco11g01404 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01404 Phco-Chr11 10652160 10656212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco11g01404 Pkinase 2.7e-67 CL0016