Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01398 ATGGAATCTGTAGATCTCTCTACTATTAGTCTCCGGCCATTCAAGATTAGTGATGTTGATGATTTCTTCTTGTGGGCAGGGGATGATGAAGTGACCAGAAACCTCCGATGGAAGACTTGTGGCTCTAAGGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAGTCTGCCTTGATGACTGTTCCATCGGATTTGTTTCAGTATATCCTTGGTCAGGTGATGAAAGACACAAGGCTGACATAGGCTATGCCATTGGGAGCAGCTACTGGGGCCAAGGGATAGCCACCAAAGTGCTCCAGATTGCTGTGCCTCAAGTCTTCAAGGACTTTCCCAATTTGCTAAGGTTGCAGGCTTTTGTTGATGTTGATAACAAACCTTCTCAGAGGGTGTTGGAAAAGGTTGGCTTCACTAGAGAGGGTGTTCTCAGAAAGTACACTTATTTCAAAGGAGTTCTTAAGGATTTTGTTGTGTATAGTTTCTTGTCCACAGAGAAAATTCTTTCAGGTGACTAG 534 0.4476 MESVDLSTISLRPFKISDVDDFFLWAGDDEVTRNLRWKTCGSKEEALAFIRDVCIPHPWRRSVCLDDCSIGFVSVYPWSGDERHKADIGYAIGSSYWGQGIATKVLQIAVPQVFKDFPNLLRLQAFVDVDNKPSQRVLEKVGFTREGVLRKYTYFKGVLKDFVVYSFLSTEKILSGD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01398 177 Pfam Acetyltransferase (GNAT) domain 10 144 IPR000182 GO:0016747
Phco11g01398 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 165 IPR000182 GO:0016747
Phco11g01398 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 168 IPR016181 -
Phco11g01398 177 Gene3D - 5 174 - -
Phco11g01398 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01398 Phco-Chr11 10598760 10599293 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco11g01398 Acetyltransf_3 6.7e-24 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01398 11 10598760 10599293 Phco11g01398 11 10598760 10599293 ECH