Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01381 ATGGCCTCTCAGCACCACGATGCCGTTTTCCGCGAAGAAGACATGGACGACGACGACGACGAGTCTCAGGAGGACGAAGAGTTTGAAGAAGACGACGACGTTTTGGCCGCCGACGATGAAGAAAACGAGCGCTCTCCCTCCGCCGCTCTCGCCGTCACCGTCGCCGTACCCGGTTCCGCCATCTCAAACGGCGGAGCCGCTCCACTTTCTACGTCCACCGCCACCACCATCGTTATCGGCGACTCTTCCGATCCGAAGAGGCGGCGCTTGGAGACAATCGAGGAGAAGAAGCCGCCGCCGCCGCTGGACGACTCGCGGCGGCTGTTCCAGCGGCTGTGGACCGACGAGGACGAGATCGAGCTCCTGCAAGGGTTCCTGGACTACACCTCTCAGCGAGGATCCTCTCACCACAACGACACCGCTCTATTCTACGACCAAATAAAGTCGAAGCTCCAACTCGATTTCAACAAGAACCAGCTGGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGAAACGTCCTCAACAAGATTGGCTCCGGCAAGGAGTTCTCCTTCAAGAGCGCGCACGATCAAGCAACCTTCGAAATCTCTCGCAAGATCTGGAGCAGCGTGGCTCCAATCGGCGAAAATTCCTTGGACGACGACGAAATCAACCCTTGCGCCAACCCTAACCCTAGCCCCCACCCTAACCTTAATTTTAGCCCTGTAATTCACAAGAACGAAACGAATTCCAGGAATTCGGCGGAGAAGAAAACACCGAAACGCTCCCGACCTCGATCGGCGGTGAAAGTCGAGTCAAACGATGGATCGGCGTCGAACAGAGATCATAATTGTACTAGCAATGCTACAGCTACGGTTACTCCTACTGCTACCGCTAGTAACACTACTGCTGCTCCTGCTACTACTACTAATAACAATTGTAACAGTGGTTATAGCAAGAACATACCGAGTTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAGGGAGTTGATGGGAGCGATGGGAGGGGGAGCGTTTGGGGGAAGAGGTTCGTTGAATTTAAACCCTTTGTCTTTGATGAATTTGAGTTATGGTGGTGGAGAATTGGTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAGGTGTACTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCCGCCATGGAGGAGTTGCGGTCCAGTGGAGGAGGCTGA 1224 0.5392 MASQHHDAVFREEDMDDDDDESQEDEEFEEDDDVLAADDEENERSPSAALAVTVAVPGSAISNGGAAPLSTSTATTIVIGDSSDPKRRRLETIEEKKPPPPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSSVAPIGENSLDDDEINPCANPNPSPHPNLNFSPVIHKNETNSRNSAEKKTPKRSRPRSAVKVESNDGSASNRDHNCTSNATATVTPTATASNTTAAPATTTNNNCNSGYSKNIPSLIEETVRSCLSPVLRELMGAMGGGAFGGRGSLNLNPLSLMNLSYGGGELVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSSGGG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01381 407 MobiDBLite consensus disorder prediction 213 300 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 244 263 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 264 300 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 76 103 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 13 39 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 82 103 - -
Phco11g01381 407 Pfam Protein of unknown function, DUF573 109 203 IPR007592 GO:0006355
Phco11g01381 407 Coils Coil 157 177 - -
Phco11g01381 407 Coils Coil 380 400 - -
Phco11g01381 407 MobiDBLite consensus disorder prediction 1 51 - -
Phco11g01381 407 PANTHER BNAANNG10740D PROTEIN-RELATED 4 400 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01381 Phco-Chr11 10427216 10428439 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Phco11g01381 DUF573 1.6e-34 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01381 11 10427216 10428439 Phco6g01137 6 11436516 11437685 PCT