Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01346 ATGAGTTTCCGTGCAAAAGGTCCCTTGTTTCTTGTTTGTGTCCTTGTTTTGTTGAATGGCATTCATGGTGCATGGAATGAGGAGCCAGGGTCTTTGATCTTGGGTTGTGGATTGGATGAAGGAGGTGCTGAAGATGCTGATGCAAGAAAATGGAGTCCTGATAAAAAGTTTTTGGGGACAGATGGTGGTTCAATCACATCCAAAGCCTCTTACCAAGACCCTTCTCTTGCGTCTGAGATTCCATACATGTCAGCGCGTATTTTCACATCTGAATCAACATACACATTCCCCGTTAAATCTGACAAGCGTTATTGGCTCAGGCTCCACTTTTACCCCGCTCTTTATGGCAGTTTCGATCCCTCTGACGCATATTTCTCCGTGGCTGCAAATGGGGTTACCCTCCTCTCCAATTTCAGCGCCTCAGTCACTTGTGAGGCTCTATCTCAAGCTTACATTGACAGAGAGTATTCCCTTGCTCCTTTGAATTCAGATACCCTGACTCTCACTTTCAAGCCTTCTGATAAATACAAAGGTGCATTCGCTTTTGTTAATGGCATTCAGCTTATCCAAATACCCGATTTGTTTGATTCTGCAACATTGATAGGGTATGATGGCCAAACCATGGATGTTACAACCTTGAATTTCCAAACCATGTTTAGACTAAATGTTGGGGGGCAGTTCATATCTCCAGTCCAAGACTCTGGACTTACAAGGATGTGGTATGATGACACACCTTACCTTTATGGGTCAGCCAGTGGCGTGACCAACAAAGCTGAGAAGAATGTCACAATCAACTATCAGAGCATGGCAGAGTATATTGCTCCTCTTGATGTCTACTCCACATCTAGATCAATGGGGGGAGATAAAAATATCAACATGGGCTACAATCTCACTTGGAGCTTCCGTGTTGATACCAATTTCATGTATCTTGTAAGGTTACATTTCTGTGAATACTACTACTCCAAGATCAATGAGATTGTCTTCAAAATCTTTGTCAACAACCAAACGGCACAAGATCAAGCCGATGTGATTGGGTGGTCAGGAGGCATAGGAGTGCCAACTTATAAGGACTACGTGATATATGTCGAAGATGGAAAGACTAATGACTTGCTCTGGCTTGCACTTCACCCCGACCCTGACACAAAGCCTGAGTTCTACGATGCCATACTCAATGGAGTGGAGATATTCAAGCTCAATGAGACAGACTTATCTGCTCCCAATCCTCTTCTTTCAGACATGCTCCTCAAAGAGCATGAGGAAGAGGAAGCTGGTGTCTTCACCCACAAATATATTCATCATTCTGTTATCGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCTTTTATGGCTGTAGTATGTGTTGCTGTGTACAACAAGAAGAAGAAAGAACCAGGGTCAGAGTCTCAAACTGGCTGGCTTCCCGTCTATTTGAACTCACACTCTACCAAATCCAGCAAGTCTGGAAAGAGCAGTGCCAACTTATCCGCCATGTCTCAGGGTCTTTGCCGCTATTTCTCCTTGCAAGAGATAAAGCAAGCAACCAAGAATTTTGATGACTCCAACGTAATTGGGGTTGGCGGATTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGAGTGAAGGTGGCAATCAAGAGGTCCAACCCACAGTCAGAACAAGGAGTTAATGAATTCCAAACGGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCGTTGATTGGTTTCTGCGAGGAAAATGACGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGAACCATGAGGGAGCATCTTTACAAGGGCAACAAACCTATCTCTACTTTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAAAGGGCTTCACTACCTTCACACTGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGAATGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACTGGTCCAAATATGAACAATGATGGTCATGTTAGCACTGTGGTGAAGGGTAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTTTACTCATTTGGGGTTGTTCTGTTTGAAGCACTGTGTGCCAGGCCTGTTCTCAATCCTAACCTTCCAAAAGAACAGGTTAGTCTTGCTGAATGGGCATTGATTTGCAAGAAAAAAGGAACTCTAGAGGATATGATTGACCCTTGTCTCAAGGGAAAAATCAATCAAGAAAGCTTGAAGAAGTTTGTAGACTCGGCTGAGAAGTGTTTGTCTGATCATGGTGCTGATCGTCCCTCGATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAATCTGCAAGAAAATATTAATGTTGCGGGTGGTTCAACTCATTCTGCTTCTACTAAAGAAAGTGAGTTAAAAGATATAAGCCTGGGAGAAAACGACATAGCACGCCACTACAAAAGCTTGAGCCTTGGAAGTGATGTTGACATTAGCAACGATTCGACAGAGAATCAGCATGAAATCTTCTCACAACTTGTCAATCCGCAAGGACGATGA 2592 0.4333 MSFRAKGPLFLVCVLVLLNGIHGAWNEEPGSLILGCGLDEGGAEDADARKWSPDKKFLGTDGGSITSKASYQDPSLASEIPYMSARIFTSESTYTFPVKSDKRYWLRLHFYPALYGSFDPSDAYFSVAANGVTLLSNFSASVTCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKYKGAFAFVNGIQLIQIPDLFDSATLIGYDGQTMDVTTLNFQTMFRLNVGGQFISPVQDSGLTRMWYDDTPYLYGSASGVTNKAEKNVTINYQSMAEYIAPLDVYSTSRSMGGDKNINMGYNLTWSFRVDTNFMYLVRLHFCEYYYSKINEIVFKIFVNNQTAQDQADVIGWSGGIGVPTYKDYVIYVEDGKTNDLLWLALHPDPDTKPEFYDAILNGVEIFKLNETDLSAPNPLLSDMLLKEHEEEEAGVFTHKYIHHSVIGGAAGGAAGFAFMAVVCVAVYNKKKKEPGSESQTGWLPVYLNSHSTKSSKSGKSSANLSAMSQGLCRYFSLQEIKQATKNFDDSNVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTMREHLYKGNKPISTLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMNNDGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPNLPKEQVSLAEWALICKKKGTLEDMIDPCLKGKINQESLKKFVDSAEKCLSDHGADRPSMNDLLWNLEFALNLQENINVAGGSTHSASTKESELKDISLGENDIARHYKSLSLGSDVDISNDSTENQHEIFSQLVNPQGR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01346 863 Gene3D Phosphorylase Kinase; domain 1 477 592 - -
Phco11g01346 863 ProSiteProfiles Protein kinase domain profile. 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01346 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Phco11g01346 863 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Phco11g01346 863 FunFam FERONIA receptor-like kinase 213 399 - -
Phco11g01346 863 FunFam FERONIA receptor-like kinase 31 192 - -
Phco11g01346 863 CDD STKc_IRAK 523 791 - -
Phco11g01346 863 FunFam receptor-like protein kinase FERONIA 479 592 - -
Phco11g01346 863 Pfam Protein kinase domain 519 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01346 863 Gene3D Transferase(Phosphotransferase) domain 1 593 809 - -
Phco11g01346 863 FunFam Receptor-like protein kinase FERONIA 593 812 - -
Phco11g01346 863 SMART serkin_6 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01346 863 SUPERFAMILY Protein kinase-like (PK-like) 492 793 IPR011009 -
Phco11g01346 863 PANTHER OS07G0166700 PROTEIN 501 797 IPR045272 GO:0004714|GO:0006468
Phco11g01346 863 Gene3D - 213 399 - -
Phco11g01346 863 Gene3D - 34 191 - -
Phco11g01346 863 Pfam Malectin-like domain 35 397 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01346 Phco-Chr11 10200405 10202996 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco11g01346 Malectin_like 2.2e-34 CL0202