Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01311 ATGCACCAAGAAGAAGCAGCCGTCAAGAAACAACAATACCAAGCGTTGGAAGAAATCGGTCGAGGCAAATTCGCCACCGTCTTCCGCAGCTTCCACCCCTCATCCAACCAATTCTACGCTCTCAAACTCATCAACAAGCGCCTCCTCACCGACGCCACCGACCGCCACTGCCTCGAAGTAGAGGCCAAGGCCATGACCTTCCTCTCTCCCCACCCCAACATTCTCAGAATCATTGACACCTTCCAAGACGCCCTAACCTCCACCATCGTTCTCCCGCTCTGCCAGCCCCGCACCCTCTTCGACCACATCGCCGATGGCCCCCTGCCGGAGTCCCACGCCGCCTCCCTCACCAAGCAGCTTCTCGAAGCCCTCACGCACTGCCATGCGCTCGGACTCGCCCATAGAGACATCAAACCCGAAAACCTCTTATTCGACGAAGCCAACAACCTTAAACTCTCCGACTTCGGCTCCGCGGAGTGGTTCGGTGAGGGCAGGACCATGAGTGGCTTGGTGGGCACCCCTTATTACGTGGCTCCTGAAGTTATCATGGGAAGGGACTACGATGAAAAAGTTGATGTTTGGAGCAGTGGGGTGACTCTTTACGCCATGTTGAGTGGCTTTCCACCCTTCTATGGAGACTCTTCTGCAGAAATTTTTGAAGCTGTTGTAAGGGCTAATCTTCGGTTTCCTACCACAATTTTTAGGTCTGTGTCTGCTCCTGCTAAGGATCTTCTTAGGAAGATGATTTGTAGAGATCCCTCTAGACGTATCTCTGCACACCAAGCATTGAAACATCCTTGGATTTTGAGTGCTGATCTTTCTTGA 825 0.5285 MHQEEAAVKKQQYQALEEIGRGKFATVFRSFHPSSNQFYALKLINKRLLTDATDRHCLEVEAKAMTFLSPHPNILRIIDTFQDALTSTIVLPLCQPRTLFDHIADGPLPESHAASLTKQLLEALTHCHALGLAHRDIKPENLLFDEANNLKLSDFGSAEWFGEGRTMSGLVGTPYYVAPEVIMGRDYDEKVDVWSSGVTLYAMLSGFPPFYGDSSAEIFEAVVRANLRFPTTIFRSVSAPAKDLLRKMICRDPSRRISAHQALKHPWILSADLS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01311 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Phco11g01311 274 Gene3D Transferase(Phosphotransferase) domain 1 97 274 - -
Phco11g01311 274 PIRSF ILK 2 264 - -
Phco11g01311 274 CDD STKc_CAMK 12 267 - -
Phco11g01311 274 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Phco11g01311 274 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01311 274 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 268 - -
Phco11g01311 274 FunFam Maternal embryonic leucine zipper kinase 4 273 - -
Phco11g01311 274 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Phco11g01311 274 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01311 274 SUPERFAMILY Protein kinase-like (PK-like) 9 270 IPR011009 -
Phco11g01311 274 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01311 Phco-Chr11 9850786 9851714 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco11g01311 Pkinase 1e-68 CL0016