Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01305 ATGGAAAAAGGGCTGCTTCTTTTGTTGTTGCTGTTGGTTATGGTGCTTTCTGCCTTTGCCATCGATGTGGAATATTCACACTGCAATTGTGATGAGGAAGGGCTTTGGAGCATCCACAACGTCCTGGTTTGCCAGAAAGTGAGCGACTTTTTCATCGCCATTGCATATTTTTCCATTCCCCTTGAGCTCCTTTACTTTGTCAGTCGCTCCAATGTCCCCTTTAAATTGGTCTTCCTTCAATTCATTGCCTTCATAGTTCTCTGTGGATTGACCCATTTACTCAACGCCTATACTTACTATGGCCCCCACTCCTTCCGGTTGTTTCTTTCCCTCACTGTTGCTAAGTTCCTCACTGCTCTTGTCTCCTGTGCCACTGCCATTTCCTTTCCCACCCTCATACCTCTTCTGCTGAAAATTAAAGTGAGAGAGCTCTTCTTGAGGCAGAATGTGTTGGAATTGGGCCAAGAGGTTGGGATTATGAAGAAACAGAAGGAAGCTAGTTGGCATGTTAGGATGCTCACCTGCTTTGGTCTTGAAGTCGATGTTGACAAGTCTTTGCCTGATCTGGTCATAGGTGATGAGGCAAGGTCTTTCCAAATATCTCTCCTAGCATGTTTCAGTCCAGGGGACACGGCTTTCTTTGTCATCACCTTCATAGTTTCCTTTCTGTCTAGCAACGTTTTGCATCAGATGATGCAAGGTAATATTTGGATATCAACTAACACTCTGGGTTTGGCACAAGGAATGACGCTCCTTCTCAAGTTTCAGACAGGATCATCACATGGAAGATTCAATCTTGCTCCTAAAGATTGTTCAAACTCCCAGTTTAAAGGGCTTAAGGTTGTGTTAGCTGATGACGATGATGTAAACAGGACTGTGACCAAGAAGCTACTTGAGAAACTGGGATGTCACGTAACTGCTGTTTCATCAGGATTTGAATGTCTTGGTGCATTAAGTGTCTCCGGTAACTTATTTAAAATTATTTTCTTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCAAAAAGGATTAGGAAATTGCAAAGCCATAATTGGCCCTTGATCATAGCTTTTACTGCTAGTGCAGAAGAGCACATCAAGGAGAGATGTCTACAGGTGGGAATGAATGGATTCATTCGAAAGCCTATTCTCCTTCATGAAATAGCAGATGAACTTACAACTGTACTGCAACGTACAGTTAGCAATCCTATTACACTAGCCAAGCTGAAATGCGAGGCTGAATGCAGTGAACAATTTTATTACACCAACCAAGTTGGGACGAAGCTTAATGCAATCAACAATTTTACACTAGTTGAGTTGAGAAGCGAGGTTGAACACAATCATCAATTTTATTACACCAGCCGAGCCGAGTTAGGAGGCGAGGTTAAACGTAGTTAG 1404 0.4274 MEKGLLLLLLLLVMVLSAFAIDVEYSHCNCDEEGLWSIHNVLVCQKVSDFFIAIAYFSIPLELLYFVSRSNVPFKLVFLQFIAFIVLCGLTHLLNAYTYYGPHSFRLFLSLTVAKFLTALVSCATAISFPTLIPLLLKIKVRELFLRQNVLELGQEVGIMKKQKEASWHVRMLTCFGLEVDVDKSLPDLVIGDEARSFQISLLACFSPGDTAFFVITFIVSFLSSNVLHQMMQGNIWISTNTLGLAQGMTLLLKFQTGSSHGRFNLAPKDCSNSQFKGLKVVLADDDDVNRTVTKKLLEKLGCHVTAVSSGFECLGALSVSGNLFKIIFLDLHMPEMDGFEVAKRIRKLQSHNWPLIIAFTASAEEHIKERCLQVGMNGFIRKPILLHEIADELTTVLQRTVSNPITLAKLKCEAECSEQFYYTNQVGTKLNAINNFTLVELRSEVEHNHQFYYTSRAELGGEVKRS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01305 467 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 174 - -
Phco11g01305 467 Gene3D - 279 445 - -
Phco11g01305 467 ProSiteProfiles Response regulatory domain profile. 280 398 IPR001789 GO:0000160
Phco11g01305 467 FunFam Ethylene receptor 277 401 - -
Phco11g01305 467 Pfam Response regulator receiver domain 281 392 IPR001789 GO:0000160
Phco11g01305 467 CDD REC_ETR-like 279 394 - -
Phco11g01305 467 SMART REC_2 279 394 IPR001789 GO:0000160
Phco11g01305 467 SUPERFAMILY CheY-like 275 400 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01305 Phco-Chr11 9803442 9809880 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco11g01305 Response_reg 2e-22 CL0304