Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01283 ATGAAAACGAAAGTCCACTTACCTCGCTACCTTTTGTTTGCACTTCTATTTCTTGCACCATTCCCACACTCCTCCCCACTCCTATCTCCTCCTGGATTCTATTATCCACAAGGATCTTGTGTGCTGAAGTTCAACACAAGCCAATATGTGGCATTTGGCGAGTGCATCGGTGTGAAAGAGAATATTTACATGTGGGGTGAGGATGGGTTCCCGACCACGTTGTGCTGTCGAAATGCTCTCGCGATTTTGTCCAATGCGTTGGCTTCAGACGCACTGAGCTCGGGAGGACAAGTGTTCCTTTCCCAAGATCAATGGCAGAGTTGTTCACAGTCATTTCACCCGCAGCAAGGGATGTCACTTGACTCATGTGGCTTTGACAACTTGTACCGAGGCAGTTCCATATGCTCCGACTTGATTTTGCAGGATGTTAGGAACCTGCAACAGTACCAATACGCATTGAGCCAGTGCTCCCACTTCAACCAACGTTTTGAGGAATCTTGTGCAGATTGTACCAGTGGAATCTTGAGCGTGAGAGATACTTTATATTCTCAAGTGGCCAAAAACAACAACGACACTGACAGAGCCATATGTGGGGTAGCAGCTATTATTGCTCTTGCAGCTGGCAGACCAAACGATCCTCTCGTTGACAAATTTTTACGATGCTTGCCACCGTCAGCCTCAGGATCAGACAAGAGATCTCTGTGGAAAGCCTTGCTGAGTGTGCCAGTAGTTGTGATTGTAATATTGCTTGTGGTTATTATGGTCAAATGTTTGTCCAAGAAGAAGGGTCGTAGACAGGTTGACTTGAAAGAGATCACTGCATGGTCTGGATTGTACTGGTTCTGCAAAAGGGAAATTGAGAATGCCATGAATTATGGTGGTCGAAAGATAAGCCTTGGACGTGGAAGTGCAGGGCAGGTATATAGAGGCGTTCTACCTAGTGGTCAAATCGTGGCCATCAAGCATTTAACAAAGAGTAACACCTCTGAGTCTTTCACTCGAGAAGTTGAAGGCCTTTCAAGGCTTCGCCATCCAAACTTGGTTTGCCTCTTTGGGTGCTGCATTGAAGGGGATGAGAGATATTTAGTCTATGAATTTTGTGCAAACGGGAATCTTGCTCAACATCTCTTAAGAAGAGATAGTCACTTGAGTTGGGAAACAAGAGTGAGAATTTTGAGAGATTGTTCATTTGCACTCAAGTACCTCCACCATCATATGGAAGGCTGTGTTGTACATAGAGATATAAAGCTTACGAACATTCTTTTGACTGAGAAATACCAAGCCAAACTGTCAGATTTTGGACTGTCAAAGGTGATGGGAATCAAAGAGAGCAAGGTTTTTACCGATGTAAGAGGAACCATAGGCTACATGGATCCAGAATACATGAGTAATGCCAAGCTAACATGTGCCAGTGATGTATACAGTTTTGGTATTGTTGCTTTGCAAATATTGTCTGGACAGAAAGTCATAGAGTTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCATTGTCTGATTTTGAAGACCCACGGCTAAAAGGAAAGGTTGATAAGGCAGACTTTGAATCCATCCTACAAATTGCAGTGTTGTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACCATTGAGGTTGTTTTTGAAGAATTGGACAAGGTCTGCATGGACACGGAAACCAGGATGAAGACAAAGAAGGATGAGAGCTCATCAACAACATCCACCCCCAGCTCCAAATCCTCCAGATCAGCTCATCTTTGA 1785 0.4454 MKTKVHLPRYLLFALLFLAPFPHSSPLLSPPGFYYPQGSCVLKFNTSQYVAFGECIGVKENIYMWGEDGFPTTLCCRNALAILSNALASDALSSGGQVFLSQDQWQSCSQSFHPQQGMSLDSCGFDNLYRGSSICSDLILQDVRNLQQYQYALSQCSHFNQRFEESCADCTSGILSVRDTLYSQVAKNNNDTDRAICGVAAIIALAAGRPNDPLVDKFLRCLPPSASGSDKRSLWKALLSVPVVVIVILLVVIMVKCLSKKKGRRQVDLKEITAWSGLYWFCKREIENAMNYGGRKISLGRGSAGQVYRGVLPSGQIVAIKHLTKSNTSESFTREVEGLSRLRHPNLVCLFGCCIEGDERYLVYEFCANGNLAQHLLRRDSHLSWETRVRILRDCSFALKYLHHHMEGCVVHRDIKLTNILLTEKYQAKLSDFGLSKVMGIKESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLKGKVDKADFESILQIAVLCVAKSSKGRPTIEVVFEELDKVCMDTETRMKTKKDESSSTTSTPSSKSSRSAHL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01283 594 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 587 - -
Phco11g01283 594 MobiDBLite consensus disorder prediction 577 594 - -
Phco11g01283 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Phco11g01283 594 Pfam Protein kinase domain 298 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01283 594 MobiDBLite consensus disorder prediction 567 594 - -
Phco11g01283 594 SUPERFAMILY Protein kinase-like (PK-like) 279 559 IPR011009 -
Phco11g01283 594 Gene3D Transferase(Phosphotransferase) domain 1 367 588 - -
Phco11g01283 594 FunFam probable receptor-like protein kinase At5g59700 367 578 - -
Phco11g01283 594 Pfam SPARK 37 192 IPR043891 -
Phco11g01283 594 Gene3D Phosphorylase Kinase; domain 1 254 366 - -
Phco11g01283 594 ProSiteProfiles Protein kinase domain profile. 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01283 594 SMART serkin_6 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01283 Phco-Chr11 9598143 9602444 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Phco11g01283 Pkinase 1.6e-46 CL0016