Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01281 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAAATGCTATAGCAAGAGGGAGCAGCAAGGGTTTTCAACACAAGAAAACGTTATAGCAACAAGAACACCTCAGGATGTAAAGAAACAAAAGGGAGATGATCCAAACAATGTTGACACTTCAAATATTCAAGCACAAAATTTCACGTTCCGTGAGCTAGCAATTGCAACAAAGAATTTTCGGCAAGAATGCTTGATGGGTGAAGGGGGCTTTGGCAGAGTTTACAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAACAACTCGACCGAAATGGAGGGCAAGGAAGTAAGGATTTTCTAGTTGAGGTTTTAATGTTAAGCCTCTTAAACCATGAAAACCTCGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTGTATGAGTTCATGGCAGGTGGCTCTTTAGAAGGCCTTCTTCTTGACAGGAAATCAGATGAACCTCCATTAGATTGGTTTAGCAGAATGAAAATAGCATCACATGCCGCGAAAGGACTATGGTACTTGCACGACAAGGCCAACCCTTCAGTTATATATCGGGACTTGAAATCTTCGAATATCTTGCTGGATGATGATTTCAATGCAAAACTATCAGATTATGGATTGGCCAAACTTGCTGGCAAAGATAAGATGAACATTGTCCCCACAAGAGTAATGGGAACTTATGGTTACAGTGCTCCTGAGTACGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTCTACAGTTTTGGAGTTGTCCTGCTAGAGCTCATTACTGGACGACGTGCGGTTGACACCACAAGAACACACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTTAGGGATCCAAAGAGATATCCAGATATGGCAGATCCAAATTTGAATAAAGATTTCCCAGAAAAGGATCTTAACCAAGCTGTTGCAATTGCAGCCATGTGCTTGCAGGAGGAAGCAGCAGCTCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCGCTACTCCAGAGGGTGATGCCGCTGAAAATGACTGTTGTAGCTCCTCCGATGAAGATAGTTCTTCTAGCGAAGACAATGGAACTGCTAAAAACCAGGTTAGTGCAAAATACCAAGAAAGTGAAGACGCCTCAGAATCTGAGTATGATTATTATGAGAATGAAAACCAACATAATTACAGTCCTCAAGACACTAAAGAGACCAAGGAGTCCTACTCCAAATCGAGCCGCAAGAGCAGCACCAAATCAGAGAATGGAATCGCTTCCTCTAGCCAAAGAAGCAGCTCCAATTCAGATTCAGAACATGGACGTGTCTCAATCGGCCGCAAAAGCTGTAGGAAAAAGAAATCTTCATTAAACCAGAGGAGCAGTAAAAAGTCTTCTTTGAAGCAAAAGAGCAACAAGAAATCTTCTGTCAAAGTATTAAGCGACAAGAAAAGTCATTCATCCAATTCAAGTAGCAGTGGAACGTTACAACATGATGGTGTCGATATTATTGACCGTAGCGGAAGCCGGCCATCAGAAGGGAACATTTCAATTGGCCTAATTAGTAGTGAGAGTGTTCACTCAGACAATGACAGCATAAGGTCCAAGGGAAGGAGCAGCATGCATTTAGATTATGCCAAAACCAAGGAATCATAA 1686 0.4217 MNCFPCFSKTKKCYSKREQQGFSTQENVIATRTPQDVKKQKGDDPNNVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGGQGSKDFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMAGGSLEGLLLDRKSDEPPLDWFSRMKIASHAAKGLWYLHDKANPSVIYRDLKSSNILLDDDFNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRTHDEQNLVSWAQPIFRDPKRYPDMADPNLNKDFPEKDLNQAVAIAAMCLQEEAAARPLMSDVVTALSFLSTATPEGDAAENDCCSSSDEDSSSSEDNGTAKNQVSAKYQESEDASESEYDYYENENQHNYSPQDTKETKESYSKSSRKSSTKSENGIASSSQRSSSNSDSEHGRVSIGRKSCRKKKSSLNQRSSKKSSLKQKSNKKSSVKVLSDKKSHSSNSSSSGTLQHDGVDIIDRSGSRPSEGNISIGLISSESVHSDNDSIRSKGRSSMHLDYAKTKES 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01281 561 CDD STKc_IRAK 76 344 - -
Phco11g01281 561 MobiDBLite consensus disorder prediction 492 508 - -
Phco11g01281 561 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
Phco11g01281 561 ProSiteProfiles Protein kinase domain profile. 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01281 561 Gene3D Transferase(Phosphotransferase) domain 1 147 369 - -
Phco11g01281 561 MobiDBLite consensus disorder prediction 352 561 - -
Phco11g01281 561 MobiDBLite consensus disorder prediction 408 425 - -
Phco11g01281 561 PANTHER OS07G0668900 PROTEIN 3 353 - -
Phco11g01281 561 FunFam Serine/threonine-protein kinase PBS1 147 361 - -
Phco11g01281 561 MobiDBLite consensus disorder prediction 539 561 - -
Phco11g01281 561 MobiDBLite consensus disorder prediction 24 51 - -
Phco11g01281 561 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
Phco11g01281 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Phco11g01281 561 MobiDBLite consensus disorder prediction 363 388 - -
Phco11g01281 561 Gene3D Phosphorylase Kinase; domain 1 30 146 - -
Phco11g01281 561 SMART serkin_6 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01281 561 MobiDBLite consensus disorder prediction 426 450 - -
Phco11g01281 561 Pfam Protein kinase domain 72 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco11g01281 561 MobiDBLite consensus disorder prediction 520 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01281 Phco-Chr11 9593430 9595999 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco11g01281 Pkinase 6.9e-46 CL0016